Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01239 ATGAAGATCATGAAATCATATGCACTGTTTTTCTTGCTTCTCATTGCATTTGCTTCACAGACAGTGGTGCAGACAGAGGCAAGAGTGTGTGAATCACAGAGCCATGGATACAAAGGTCCATGTTCAGGTGACCACAACTGTGCACTTGTTTGCAGGAATGAAGGTTTCTCTGGTGGTAGATGCAGAGGATTCCGCCATCGTTGCTTTTGCACCAAGCTTTGTTAA 225 0.4444 MKIMKSYALFFLLLIAFASQTVVQTEARVCESQSHGYKGPCSGDHNCALVCRNEGFSGGRCRGFRHRCFCTKLC 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01239 74 ProSitePatterns Gamma-thionins family signature. 28 51 IPR008176 GO:0006952
Tsu07g01239 74 PRINTS Purothionin signature 29 44 IPR008176 GO:0006952
Tsu07g01239 74 PRINTS Purothionin signature 59 73 IPR008176 GO:0006952
Tsu07g01239 74 PANTHER DEFENSIN-LIKE PROTEIN 1 4 74 - -
Tsu07g01239 74 CDD Knot1 39 71 IPR003614 GO:0006952
Tsu07g01239 74 Gene3D - 22 74 IPR036574 -
Tsu07g01239 74 PANTHER DEFENSIN-LIKE PROTEIN 4 74 - -
Tsu07g01239 74 SUPERFAMILY Scorpion toxin-like 28 74 IPR036574 -
Tsu07g01239 74 SMART gth_4 29 74 IPR003614 GO:0006952
Tsu07g01239 74 Pfam Gamma-thionin family 28 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01239 Tsu-Chr7 10750925 10751242 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01239 5 74 Plant Defensins Gene Families AT5G63660 60.000 2.47e-28 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01239 - - lang:109326357 109.768