Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01231 ATGAAAGAGCACTGCATGGAACCTTTTTTCGTATTTCAGGTTTTCTGTGTTGGTCTCTGGTGTTTGGATGAATATTGGTACTATAGTTTGTTTACTCTATTTATGCTGTTTATGTTTGAGTCGACCATGGCTAAAAGTCGGTTGAGGACTCTGACTGAGTTAAGACGTGTTAGAGTGGATAATCAAATTGTAATGGTTCATCGCTGTGGCAAGTGGGTAAAAATCTCCGGTACAGATCTTTTGCCTGGTGATGTTGTCTCTATAGGCCGCTCTTCTGGTCAGAATGGAGAGGAAAAATCTGTACCAGCAGACATGCTTATTTTGGCGGGAAGTGCTATTGTGAATGAAGCTATTCTCACAGGCGAGTCTACTCCTCAATGGAAGGTGTTTCTCTTTTCTGAACTAATTGCTAAGATACTCaacatttttcttcaaaatACCTTTCCTCTAAAAACACCTGATGGTGGCTGCTTGGCTGTTGTCCTGCGAACGGGGTTTGAAACAAGTCAAGGAAAGTTGATGCGAACAATCTTGTTCTCTACAGAAAGGGTGACTGCAAATAGCTGGGAAAGTGGATTGTTCATTTTATTCTTGGTTGTATTTGCTTTAATTGCAGCCGGATATGTGCTTATTAAGGGGCTAGAAGACCCCACAAGGAGCAAGTATAAACTTATATTAAGTTGTTCTCTTATTGTTACTTCTGTGATACCTCCCGAGCTACCAATGGAATTATCAATAGCTGTTAATACTTCTTTAATTGCATTGGCACGTCGTGGAATTTTTTGTACAGAACCTTTCCGGATACCATTTGCTGGGAAGGTTGATATATGTTGTTTTGACAAGACTGGGACACTTACATCTGATGACATGGAATTTTCTGGAGTTGTTGGGTTGACAGAAACTACAGATTTGGAATCTGACATGGGTAGAGTGCCTGTACGAACACTAGAAATCCTGGCTTCTTGCCATGCATTGGTATTTGTTGAGAATAAACTGGTTGGCGATCCTCTTGAGAAGGCTGCACTTAAAGGAATCGATTGGAGTTATAAATCTGATGAGAAGGCCATTCCTAAAAGGGGAAATGGTCATTCTGTCCAAATTGTTCAGCGGTATCATTTCGCCTCTCACTTAAAACGAATGGCAGTTGTCGTTCGTATTCAGGAGGAATTTTTTGCATTTGTGAAGGGTGCTCCAGAAATTATACAAGACAGGCTCATTAACGTACCTCCAGCATATATTGAGACATACAAAAGATATACACGTCAAGGGTCTCGTGTTCTTGCTCTGGCTCACAAGTCTCTCTCTGACATGACAGTCAGTGAAGCTAGAAGCTTGGATAGGGATATGGTGGAGAGTGGACTTACTTTTGCTGGTTTTGTGGTGTTTAATTGTCCCATAAGATCAGATTCAGCTACTGTTTTATCTGGATTGAAAGAATCTTCCCATGACTTGGTGATGATTACTGGTGACCAAGCTTTGACGGCCTGTCATGTTGCTAGCCAAGTTAATATTATATCAAAACCAACATTAATCCTTAGTCCAGCAAGTAATGGTGAAGGATATAATTGGGTGTCCCCTGATGAGCATGAGACCATTCGCTACagTGGGAAAGAGGTAGAATTTTTGTCGGAGACTCATGATCTATGTGTTGGAGGTGATTGCTTTGAGATGTTGCAACAGACATCAGCTCATCTTCTAGTCATTCCTTATGTGAAGGTTTTTGCTCGAGTTGCTCCCGATCAAAAGGAACTTATCTTGACCACTTTCAAAACAGTGGGACGGGTAACATTGATGTGTGGGGATGGAACCAATGATGTTGGAGCTCTGAAACAGGCCCATGTAGGAGTTGCTCTTCTGAATGCAATACCTCCAACTCAAGGTGGAAAGTCCTCTTCAGATGCATCTGGGGAAGACGGTTCGAAATCTGCAAAGCAAAATAAATCATCTAAGCCTGCGCCGGAAACATCTGGAAAGACGATTATCCCACATGGAGAAGGCACGTCAAGAGCCAGAGGTTCTTCACAATTAGACTCCGCCAGCATTCAAAGAGCCAGAGTTGCTTCACAATCAGACTCCACCAGCAATGCATCTGCTAACCGTCATCTATCTGCTGCTGAGGTTAATAGACAGAGGCTTCAGAAGATGATGGATGAGCTTAACGAGGAAGGAGATGGCCGAGCACCCATTGTGAAGCTCGGTGATGCCTCGATGGCATCCCCATTCACTGCTAAACATGCATCTGTTGCTCCCACCACTGACATAATTCGACAAGGTCGGAGTACCCTAGTGACAACCCTCCAGATGTTTAAAATTCTTGGCCTCAACTGCCTTTCTACTGCATATGTGTTGAGTGTTATGTATCTGGATGGTGTCAAGCTAGGTGATGTACAAGCCACAATAAGTGGTGTATTCACTGCTGCATTTTTCCTCTTTATCTCACATGCACGCCCTCTTCCCACTCTCTCAGCTGAACGTCCCCACCCCAACATCTTCTGTGCTTATGTCTTGCTTTCCCTCTTGGGACAATTTGCTGTTCACCTGTTTTTTCTGATATCATCTGTCAAAGCAGCTGAAAAATACATGCCACAGGAATGTATTGAAccagatgcaagttttcatccCAACCTGGTTAATACCGTTTCCTACATGGTGAGCATGATGATCCAGGTGGCCACATTTGCCGTAAACTATATGGGCCACCCCTTCAACCAAAGTATTTCTGAAAACAGGCCATTCATGTATGCCCTCGTTGCTGCTGTTGGTTTCTTTACTGTGATAACATCCGATCTCTTCAGGGATTTGAATGACTGGTTGAAGTTGGTGCCGTTGCCAGTGGGTTTGAGGAATAACCTATTGATTTGGGCTTTCCAAATGTTTTTTGTATGCTATTCATGGGAGAGAATGTTAAGGTGGGCCTTCCCCGGTAAAGTCCCAGCTTGGAAGAGGCGACAACAGGGACATTGGAGAAAGTCTCATGGAGGGGGTTTTGGGAAGAGGGCACATCTTATCACTCGTCTCGTGGGAACCCGTCTCCTGGGGAAGACAAAAACACGTACACGTAGGACCGCTCATTGCAATGAGTTCAAGATTCACGATGTAGATTTTGAACTTGATTCGAAGAATGTCGTTGCAAAATTTCATAATAAAGGACTAGACATATCATACCTCATAGGCAATTGCCAATACATTCATAATACTCATTTTACAATCTATCAGGTTGACTTTGTTAGGAGACTAGTCAACGAGGTCGCTCATGTCAGCAGCAACTACGTCTTTCGTTTCTTTCAACGTTTGGTGTCGTCGCACTGTGTTGTCGGCCACACTGTGTCTCAATTGGCTTCTAGAGTGTACGAAGATCGATAA 3363 0.4282 MKEHCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLRTLTELRRVRVDNQIVMVHRCGKWVKISGTDLLPGDVVSIGRSSGQNGEEKSVPADMLILAGSAIVNEAILTGESTPQWKVFLFSELIAKILNIFLQNTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFALIAAGYVLIKGLEDPTRSKYKLILSCSLIVTSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFSGVVGLTETTDLESDMGRVPVRTLEILASCHALVFVENKLVGDPLEKAALKGIDWSYKSDEKAIPKRGNGHSVQIVQRYHFASHLKRMAVVVRIQEEFFAFVKGAPEIIQDRLINVPPAYIETYKRYTRQGSRVLALAHKSLSDMTVSEARSLDRDMVESGLTFAGFVVFNCPIRSDSATVLSGLKESSHDLVMITGDQALTACHVASQVNIISKPTLILSPASNGEGYNWVSPDEHETIRYSGKEVEFLSETHDLCVGGDCFEMLQQTSAHLLVIPYVKVFARVAPDQKELILTTFKTVGRVTLMCGDGTNDVGALKQAHVGVALLNAIPPTQGGKSSSDASGEDGSKSAKQNKSSKPAPETSGKTIIPHGEGTSRARGSSQLDSASIQRARVASQSDSTSNASANRHLSAAEVNRQRLQKMMDELNEEGDGRAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLSTAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLSAERPHPNIFCAYVLLSLLGQFAVHLFFLISSVKAAEKYMPQECIEPDASFHPNLVNTVSYMVSMMIQVATFAVNYMGHPFNQSISENRPFMYALVAAVGFFTVITSDLFRDLNDWLKLVPLPVGLRNNLLIWAFQMFFVCYSWERMLRWAFPGKVPAWKRRQQGHWRKSHGGGFGKRAHLITRLVGTRLLGKTKTRTRRTAHCNEFKIHDVDFELDSKNVVAKFHNKGLDISYLIGNCQYIHNTHFTIYQVDFVRRLVNEVAHVSSNYVFRFFQRLVSSHCVVGHTVSQLASRVYEDR 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01231 1120 CDD P-type_ATPase_cation 1 912 - -
Tsu07g01231 1120 PANTHER CATION-TRANSPORTING ATPASE-RELATED 1 986 - -
Tsu07g01231 1120 PANTHER CATION-TRANSPORTING ATPASE 1 986 - -
Tsu07g01231 1120 TIGRFAM P-ATPase-V: P-type ATPase of unknown pump specificity (type V) 1 954 IPR006544 GO:0006812|GO:0016021|GO:0019829|GO:0140358
Tsu07g01231 1120 SFLD p-type atpase 259 760 IPR044492 -
Tsu07g01231 1120 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 31 301 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tsu07g01231 1120 Gene3D - 274 458 IPR023299 GO:0000166
Tsu07g01231 1120 Coils Coil 695 722 - -
Tsu07g01231 1120 MobiDBLite consensus disorder prediction 624 655 - -
Tsu07g01231 1120 Pfam E1-E2 ATPase 63 258 - -
Tsu07g01231 1120 Gene3D - 33 178 - -
Tsu07g01231 1120 SUPERFAMILY Calcium ATPase, transmembrane domain M 3 974 IPR023298 -
Tsu07g01231 1120 Pfam haloacid dehalogenase-like hydrolase 275 503 - -
Tsu07g01231 1120 SFLD C1.7: P-type atpase like 259 760 - -
Tsu07g01231 1120 Gene3D - 459 635 IPR023214 -
Tsu07g01231 1120 MobiDBLite consensus disorder prediction 622 705 - -
Tsu07g01231 1120 ProSitePatterns Hypothetical cof family signature 2. 599 621 - -
Tsu07g01231 1120 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 284 468 IPR023299 GO:0000166
Tsu07g01231 1120 SUPERFAMILY HAD-like 273 624 IPR036412 -
Tsu07g01231 1120 SUPERFAMILY Calcium ATPase, transduction domain A 62 177 IPR008250 -
Tsu07g01231 1120 PRINTS P-type cation-transporting ATPase superfamily signature 599 618 - -
Tsu07g01231 1120 PRINTS P-type cation-transporting ATPase superfamily signature 278 292 - -
Tsu07g01231 1120 PRINTS P-type cation-transporting ATPase superfamily signature 115 129 - -
Tsu07g01231 1120 PRINTS P-type cation-transporting ATPase superfamily signature 480 490 - -
Tsu07g01231 1120 MobiDBLite consensus disorder prediction 668 705 - -
Tsu07g01231 1120 ProSitePatterns E1-E2 ATPases phosphorylation site. 280 286 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01231 Tsu-Chr7 10624137 10640773 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01231 1 986 Primary Pumps ATPases AT5G23630 75.670 0.0 1529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01231 K14950 - gmx:100789385 1687.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01231 07 10624137 10640773 Tsu07g01231 07 10624137 10640773 ECH