Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01230 ATGAATAAGTGGGGTGTTAATCATCAACAGGCATTCATTGGTTGGCGTGGGAGAGCTGTATGTAATTTTCCTGCTGTTACTAATGTGGAAGAGGATTCAGACAACGACGAAGAGACAGAACAAGAAGTAACTATTAAAAAGGAACCTATCTTTTTTACAGATATTAAGAAAAGGAAGCGCCTCAGCCTTAGTCAGCTTAATGAGGGGAAAGAGGAGTCGTCTGGGAAGCTTAGTCAGCTTAGTGAAGTGAAAGTGGAGTCTTGTGAAAAGTTTATTCAGCTTAGAGAGGTGAAAGAGGAGCATTGTGGGATGGAACGCAGTAGCAGGAATCAGAGAAAGAAGAATGTTGCTAAGGACAGATGGTCAGAAGAGAgGTACAAGCTGGCTGAGCAAACCATGTGGGAAGTATTGAAGGAAGAGGGTGCAACTTTTGAAAATCCAATAACCCGACCCGCACTAAGAGCAGCTGCCCGCAAATTCATTGGTGATACTGGACTTTTAGACCACTTACTGAAGCACATTAGTGGTAAAGTGGCCCCTGGAGGCACTGATCGGTTCCGAAGATGGCACAACACCACAGGAGTCATGGAGTATTGGTTGGAGAGGGCTGACTTGGATGACGTCCGCCAGGAGGCTGGGGTGCGTGACCGCTACTGGGTACCACCATCCACTAATTCTTCTGGTGAATTGGAACTGCTTAAAAAAGAAATGGCTCAAATGAAGAAAGATATGCAGGAGCTCGCTGCcaagaaggaaaagaaaactGAAAGTAACGTGATGGAGAAGACATGCCAGGAATTTGTGAAGTGGAAAGCTATAACTGATCATCGCCTTACTGAAATCATGGCTTCTGTGAAGAATTTGCAGGGCAATTATGGTGAATTGATGAATTGGAAAACTGAAGTCGAGAAACATCTTGTggatataacaaataaattgaaTGATCTTCAAGCAGCAAGAGAATGCACCACTTTTAGTCCTCCTTCAGACAAATGGAAAGATTGGTTAGAAGCCCCTAACCCAAACAATTTTCAGGAGGATGCATTGGCACCTTGGATCGGGACTTCAGAGCTGCTTAATGTTCCGCAAGAGTGTTTGCCTGAATATCCCTGCGCTGGCATGCCAACTCAGCCACTCAATGAAGAACCCACTAACAAGAAGAGTGATGCTGAGGAGCTGATGCCCACAATGCAAGAGGATCAAAATAATGTCACCCCAGATTCATCTACAACTGTTAATTCAAAGGCAGACATTGACAATTCATTGATAATGTTTCAGGAGATGTTTATGGATTTATtcaaatggaaagaaaaaatggaGCAGCAGCTGCTGGATGTATCAAACACTGTATATGGCATGCTAGCAATGAAGTCTTCAGCGGGATTGAAATTGGTTGTATTATTGACTTGTTGGTTAAGATTACCAGTTCCTTTTAGTACAGCTCTTCGTCCTTGTCCTAGAACACCTCCACCACCCGTCCTAACTATTGAGGAAGAATGCAACAAATTTGAAGAGTTCATGTCTCAGATGATGTCTAAGGGAGGACTTCTTCTTCAACAAGGCACACTTTCCACTGGCTTCTATAGTTTCATAGCATCCACCAACTTGTCTCATGTAGATATCCTCACTCCTCAAGGGGAGGAGGATGAGGCAGATGTTATCTACTAA 1668 0.4233 MNKWGVNHQQAFIGWRGRAVCNFPAVTNVEEDSDNDEETEQEVTIKKEPIFFTDIKKRKRLSLSQLNEGKEESSGKLSQLSEVKVESCEKFIQLREVKEEHCGMERSSRNQRKKNVAKDRWSEERYKLAEQTMWEVLKEEGATFENPITRPALRAAARKFIGDTGLLDHLLKHISGKVAPGGTDRFRRWHNTTGVMEYWLERADLDDVRQEAGVRDRYWVPPSTNSSGELELLKKEMAQMKKDMQELAAKKEKKTESNVMEKTCQEFVKWKAITDHRLTEIMASVKNLQGNYGELMNWKTEVEKHLVDITNKLNDLQAARECTTFSPPSDKWKDWLEAPNPNNFQEDALAPWIGTSELLNVPQECLPEYPCAGMPTQPLNEEPTNKKSDAEELMPTMQEDQNNVTPDSSTTVNSKADIDNSLIMFQEMFMDLFKWKEKMEQQLLDVSNTVYGMLAMKSSAGLKLVVLLTCWLRLPVPFSTALRPCPRTPPPPVLTIEEECNKFEEFMSQMMSKGGLLLQQGTLSTGFYSFIASTNLSHVDILTPQGEEDEADVIY 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01230 555 Coils Coil 299 319 - -
Tsu07g01230 555 Coils Coil 230 257 - -
Tsu07g01230 555 PANTHER DYAD PROTEIN 3 457 - -
Tsu07g01230 555 PANTHER PROTEIN DYAD 3 457 IPR044221 GO:0007131|GO:0051177|GO:0051321
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01230 Tsu-Chr7 10618760 10624101 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01230 110 331 PHD Transcription Factor Family AT5G22260 25.551 3.97e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01230 - - gmx:100806484 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01230 07 10618760 10624101 Tsu07g01230 07 10618760 10624101 ECH