Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01228 ATGTCGATTTCGAACACCGCACCACCAAAAACTACCCAGGTTATCCCTTATGCAACAAAGGATCTTCATGAAGTCTACACCTTGGGTACAAAATTGGGTCAGGGTCAATTTGCTACCACATATCTCTGCATACACAACACAACAGGTGGAAcctatgcttgtaaatcaattCCAAAGAACAAACTTTTGTTCAAAGAAGATTATGATGATGTGTGGAGAGAGATTCAAATAATGCAACATTTATCTGAACTCCCAAAAATTGTGAAGATCCATGATACCTATGAAGATTCATTTTATGTTCACTTGGTTATGGAGCTTTGTGAAGGTGATTGTCACTCTCATGGTGTTATGCATAGAGACCTTAAACCTGAGAATCTTTTGTTTGATGCTGTTCAAGGTGATGCTAATCTCAAACTTGGTGATTTTGGGTTGTCTGTTTTTTATAAGCcagGTGATTCCTTTACTGATGTTGTTGGAAGCCCGTATTATGTTGCACCAGAGGTCTTGAACAAGCATTATGGACCTGAAGCTGACTTGTGGAGTGTCGGGGTTATTTCCTACATCATATTAAGTGGGGTCCCACCATTTTGGGCCgAGACCGAGCAGGGGATCTTCGCACAGATTTCTAAGGGAATACTTGATTTTGAGTCTGAGCCATGGCCTGCGATTTCAGACAGCGCCAAGGATCTAATTCGAAAAATGCTTGATAGGAATCCGGAAAAAAGGTTTACAGCTCACCAAGTGCTCTGTCACCCATGGATTGTTGATAACAATGCACCAAATGAACCTCTTGGTGTTTGA 801 0.4007 MSISNTAPPKTTQVIPYATKDLHEVYTLGTKLGQGQFATTYLCIHNTTGGTYACKSIPKNKLLFKEDYDDVWREIQIMQHLSELPKIVKIHDTYEDSFYVHLVMELCEGDCHSHGVMHRDLKPENLLFDAVQGDANLKLGDFGLSVFYKPGDSFTDVVGSPYYVAPEVLNKHYGPEADLWSVGVISYIILSGVPPFWAETEQGIFAQISKGILDFESEPWPAISDSAKDLIRKMLDRNPEKRFTAHQVLCHPWIVDNNAPNEPLGV 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01228 266 PANTHER SERINE/THREONINE-PROTEIN KINASE 111 264 - -
Tsu07g01228 266 PANTHER SERINE/THREONINE-PROTEIN KINASE 6 109 - -
Tsu07g01228 266 PANTHER CDPK-RELATED KINASE 6 109 - -
Tsu07g01228 266 PANTHER CDPK-RELATED KINASE 111 264 - -
Tsu07g01228 266 SUPERFAMILY Protein kinase-like (PK-like) 26 261 IPR011009 -
Tsu07g01228 266 Gene3D Phosphorylase Kinase; domain 1 14 107 - -
Tsu07g01228 266 SMART serkin_6 26 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01228 266 Pfam Protein kinase domain 111 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01228 266 Pfam Protein kinase domain 26 110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01228 266 Gene3D Transferase(Phosphotransferase) domain 1 109 264 - -
Tsu07g01228 266 ProSitePatterns Protein kinases ATP-binding region signature. 32 55 IPR017441 GO:0005524
Tsu07g01228 266 CDD STKc_CAMK 25 253 - -
Tsu07g01228 266 ProSitePatterns Serine/Threonine protein kinases active-site signature. 116 128 IPR008271 GO:0004672|GO:0006468
Tsu07g01228 266 ProSiteProfiles Protein kinase domain profile. 26 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01228 Tsu-Chr7 10592186 10594144 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01228 5 264 EF-hand Containing Proteins AT1G35670 61.168 1.95e-124 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Tsu07g01228 Pkinase 1.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01228 K13412 - gmx:100790443 406.757