Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01227 ATGTCGATTTCAAACACCGCACAACCAAAATCCACACAGATTCTCCCTTATGTAACAGAGGATCTTCTTGAAGTCTACACCTTAGGTAGAAAATTGGGTGAGGGTCGATTAGCTACCACATATCTCTGCACACACAACACAACAGGTAGAACCTACGCTTGCAAATCAATTTCAAAGAACAAACTTCTCTGCAaagatgatgattatgatgttgTGAGGAGAGAGATTAAAATAATGCAACATTTATCTGAACTCCCAAAAATTGTTAAGATCCATGACACCTATGAAGATTTATTTAATGTTCACTTGGTTATGGAGCTTTGTGAAGGTGGTGAGTTATTTGATAGGATCGTGCAGAAGGGACATTATGGTGAGAAACAAGCTGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATCTCAAACTTGGTGATTTTGGGTTGTCTGTTTTTTATAAGCcagGTGAAACCTTTAGTGATGTTGTTGGAAGCCCGTACTATGTTGCACCGGAGGTCTTGGACAAGCATTATGGACCTGAAGCTGACTTGTGGAGTGTCGGAGTTATTTCCTACATCATATTGAGCGGGGTCCCACCATTTTGGGCCGAGACCGACCAGGGGATCTTCGCAGAGATTTCTAAGGGAATACTTGATTTCGAGTCTGAGCCATGGCCTGCGATTTCTGACAGTGCCAAGGATCTAATTCGAAAAATGCTTGATAGGAATCCGGCAAAAAGGTTTACAGCTGACCAAGTGCTCTGTCACCCATGGATTGTTGATAACAATGCACCAAATGAACCTCTTGGTGTCTGA 906 0.3543 MSISNTAQPKSTQILPYVTEDLLEVYTLGRKLGEGRLATTYLCTHNTTGRTYACKSISKNKLLCKDDDYDVVRREIKIMQHLSELPKIVKIHDTYEDLFNVHLVMELCEGGELFDRIVQKGHYGEKQAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLKLGDFGLSVFYKPGETFSDVVGSPYYVAPEVLDKHYGPEADLWSVGVISYIILSGVPPFWAETDQGIFAEISKGILDFESEPWPAISDSAKDLIRKMLDRNPAKRFTADQVLCHPWIVDNNAPNEPLGV 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01227 301 SUPERFAMILY Protein kinase-like (PK-like) 26 290 IPR011009 -
Tsu07g01227 301 Coils Coil 129 129 - -
Tsu07g01227 301 Gene3D Phosphorylase Kinase; domain 1 28 116 - -
Tsu07g01227 301 Gene3D Transferase(Phosphotransferase) domain 1 165 298 - -
Tsu07g01227 301 PANTHER CDPK-RELATED KINASE 8 299 - -
Tsu07g01227 301 CDD STKc_CAMK 25 288 - -
Tsu07g01227 301 PANTHER SERINE/THREONINE-PROTEIN KINASE 8 299 - -
Tsu07g01227 301 Coils Coil 171 171 - -
Tsu07g01227 301 ProSiteProfiles Protein kinase domain profile. 26 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01227 301 Pfam Protein kinase domain 26 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01227 301 Pfam Protein kinase domain 170 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01227 Tsu-Chr7 10588300 10590308 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01227 8 299 EF-hand Containing Proteins AT5G23580 54.949 1.66e-109 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Tsu07g01227 Pkinase 1.3e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01227 K13412 - gmx:100790443 379.022