Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01226 ATGTCGATTTTGAACACTGCACAACCAAAACCCACACAGGTTCTCCCTTATGAAACAGAGGATCTTCTTGATGTCTACACCTTAGGTAGAAAATTGGGTCAGGGAGACTTTGCTACAACATATCTCTGCACACACAACACAACAGGTAGAACCTACGCTTGCAAATCAATTTCAAAGAAAGAACTTTTGTGCAAAGAGGATTATGATGATGTGTGGAAAGAGATTCAAATAATGCaacatttatctcaacaacCAAATGTTGTGAGGATCCATGGTACTTATGAGGATTCATTATATGTTCACTTGGTTATGGAGTTTTGTGAAGGTGGTGATTTGTATGATAGGATTGTGAAGAAGGGACATTATAGTGAGCAACAAGCTGCTAAGTTGGCTAAAAATATTGTTGAGGCTGTTCAAGAATGTCATTCTCTTGGTGTTATGCATAGAGACCTTAAACTTGAGAACCTTTTGTTTGATACTGTTGAAGATGATGCTAATCtcaaaattattgattttggGTTGTCTGCTTTTTATAAGCCagGTGAAACCTTTAGTGATGTTTTTGGAAGCCCGGACTATATGGCACCAGAGGTCTTGCACGAGCATTATGGACCTGAAGCTGACTTGTGGAGTGTCGGGGTTATTTCCTACATCATATTAAGCGGAGCCCCACCATTTTGGGCCgAGACCGAAGAGGGGACCTTCGCACAGATTTCTAAGGGAATACTTGATTTCGAGTCTGAGCCATGGCCTACAATTTCAGACAGCGCCAAGGATCTAATTCGAAAAATGCTTCATAGGAATCCCAAAAAAAGGTTTACAGCTCAACAAGTGCTATGTCACCCATGGATTGTTGATGATAACATTGCACCAAATAAGCCTCTGGGTGTCTGA 894 0.3937 MSILNTAQPKPTQVLPYETEDLLDVYTLGRKLGQGDFATTYLCTHNTTGRTYACKSISKKELLCKEDYDDVWKEIQIMQHLSQQPNVVRIHGTYEDSLYVHLVMEFCEGGDLYDRIVKKGHYSEQQAAKLAKNIVEAVQECHSLGVMHRDLKLENLLFDTVEDDANLKIIDFGLSAFYKPGETFSDVFGSPDYMAPEVLHEHYGPEADLWSVGVISYIILSGAPPFWAETEEGTFAQISKGILDFESEPWPTISDSAKDLIRKMLHRNPKKRFTAQQVLCHPWIVDDNIAPNKPLGV 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01226 297 PANTHER CDPK-RELATED KINASE 7 295 - -
Tsu07g01226 297 SUPERFAMILY Protein kinase-like (PK-like) 11 291 IPR011009 -
Tsu07g01226 297 SMART serkin_6 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01226 297 PIRSF ILK 3 286 - -
Tsu07g01226 297 PANTHER SERINE/THREONINE-PROTEIN KINASE 7 295 - -
Tsu07g01226 297 Gene3D Transferase(Phosphotransferase) domain 1 113 293 - -
Tsu07g01226 297 Pfam Protein kinase domain 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01226 297 Gene3D Phosphorylase Kinase; domain 1 28 112 - -
Tsu07g01226 297 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Tsu07g01226 297 ProSitePatterns Protein kinases ATP-binding region signature. 32 55 IPR017441 GO:0005524
Tsu07g01226 297 ProSiteProfiles Protein kinase domain profile. 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01226 297 CDD STKc_CAMK 25 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01226 Tsu-Chr7 10568715 10571848 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01226 5 295 EF-hand Containing Proteins AT1G35670 66.667 7.61e-147 420
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Tsu07g01226 Pkinase 6.4e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01226 K13412 - gmx:100805961 478.018