Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01225 ATGCAACATTTATTTCAACAACCAAATCTTGTGAAGATCCATGATACCTATGAAGATTCATTATATGTTCACTTGGTTATGGAGTTTTGTGAAGGTGGGAATTTGTATGATAGGATTGTGAAGAAGGGTCATTATAGTGAAAGACAAGCTGCTAAGTTGATTAGAACTATTGTTGAGGCTGTTCAAGAATGTCATTCTCTTGGTGAAACCTTTAGTGATGTTGTTGGAAGTCCAGTCTATATGGCACCGGAGGTCTTGCTCGAGGTTTATGGACCTGAAGCTGATTTGTGGAGTGTCGGGATTATTTCCTACATCATATTAAGTGGGGTCCCACCATTTTGGGCCGACAGCGCCAAGGATCTAATTCGAAAAATGCTTGATAGGAATCCGAAAAAAAGGAAAAGTCACGCATCTGCGTCTGGCTCAGGATTTCCTGCGCCGGGCGCAGATGGCAGCAGCTGGATGCATAAATTTTCTTCACTTCTGCGCCAGGCTCAGGATTCCTGA 507 0.43 MQHLFQQPNLVKIHDTYEDSLYVHLVMEFCEGGNLYDRIVKKGHYSERQAAKLIRTIVEAVQECHSLGETFSDVVGSPVYMAPEVLLEVYGPEADLWSVGIISYIILSGVPPFWADSAKDLIRKMLDRNPKKRKSHASASGSGFPAPGADGSSWMHKFSSLLRQAQDS 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01225 168 PANTHER SERINE/THREONINE-PROTEIN KINASE 68 117 - -
Tsu07g01225 168 Pfam Protein kinase domain 5 73 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01225 168 SMART serkin_6 1 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01225 168 ProSiteProfiles Protein kinase domain profile. 1 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01225 168 PANTHER CDPK-RELATED KINASE 1 68 - -
Tsu07g01225 168 SUPERFAMILY Protein kinase-like (PK-like) 4 136 IPR011009 -
Tsu07g01225 168 Gene3D Transferase(Phosphotransferase) domain 1 72 146 - -
Tsu07g01225 168 Gene3D Transferase(Phosphotransferase) domain 1 1 71 - -
Tsu07g01225 168 MobiDBLite consensus disorder prediction 132 152 - -
Tsu07g01225 168 PANTHER CDPK-RELATED KINASE 68 117 - -
Tsu07g01225 168 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01225 Tsu-Chr7 10563008 10566704 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01225 1 139 EF-hand Containing Proteins AT1G35670 46.269 6.59e-51 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Tsu07g01225 Pkinase 7e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01225 K13412 - thj:104800436 176.022