Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01191 ATGGATCCCGACGCATTCACCGCTAGTTTGTTCAAGTGGGACCAACGTAACGTTCTTTCAACTGCACCATCTCGTCCTCAACTTCTTGACTACTCCGTTGCTCCTTCAACTGCTCCGATGACTTATCATACGGCGAGGCTACCAAGGGAGCTTGGTGGCTTGGAGGAACTGTTCCAAGCTTATGGTATAAGATACTACACGGCGGCGAAGATTGCTGAGCTTGGTTTCACGGTGAGTACTCTGGTGGATATGAAGGATGATGAATTGGATGATATGATGAACAGTTTATCTCAGATTTTTCGTTGGGATCTTCTTGTTGGTGAAAGATATGGTATCAAAGCTGCCATTAGAGCTGAAAGAAGAAGACTTGATGAAGAGGAAATGAAACGCCGTGGTCTTCTCTCCGTTGACACCGCCAATGCTCTTGATGCTCTTTCTCAAGAAGGTTTGTCGGAGGAGCCGGTGGTGCAACGAGAAAAGGAGGCGGTAGGGAGTGGAGGAGGGAGTACATGGGAGGTAGCTGTGGCGGAGGAGAAGAGAAAGAGGCAGCAGATAAGGAGGAGGAGAATGAAAATGAAGGGAAATCTTGATCATGGTGAGAATGaggatggagaagaagatgatgaagataacAACagtggtggttgtggtggtggtggtggtgaaagACAAAGAGAACATCCATTCATTGTAACAGAGCCAGGGGAAGTTGCACGTGGCAAAAAGAACGGTCTTGATTATCTGTTTCATCTCTATGAACAATGCCGTGAGTTTCTGATTCAAGTTCAAGCCATAGCCAAAGAACGTGGTGAGAAATGTCCTACAAAGGTAACAAATCAGGTATTTAGGTATGCGAAAAAAGCTGGAGCAAGCTACATAAACAAGCCAAAAATGAGACACTATGTGCACTGCTATGCATTGCATTGTTTAGATGAGGAAGTTTCCAATGAGCTGAGAAGGAGTTTCAAGGAAAGAGGGGAGAACGTCGGTGCGTGGAGGCAAGCTTGTTACAAGCCGCTAGTGGCGATTGCTGCACGTCAAGGATGGGATATTGATGCAATATTTAACGCGCATCCGCGTCTTTCCATATGGTATGTGCCAACCAAACTCCGTCAGCTTTGTCATGCTGAGAGAAACGGTGCTGCTGCTTCGAGCTCCATCTCTGTTGGAACGACCCACCTTCCTTTCTAA 1191 0.4416 MDPDAFTASLFKWDQRNVLSTAPSRPQLLDYSVAPSTAPMTYHTARLPRELGGLEELFQAYGIRYYTAAKIAELGFTVSTLVDMKDDELDDMMNSLSQIFRWDLLVGERYGIKAAIRAERRRLDEEEMKRRGLLSVDTANALDALSQEGLSEEPVVQREKEAVGSGGGSTWEVAVAEEKRKRQQIRRRRMKMKGNLDHGENEDGEEDDEDNNSGGCGGGGGERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQAIAKERGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEVSNELRRSFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSIWYVPTKLRQLCHAERNGAAASSSISVGTTHLPF 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01191 396 Gene3D Protein LEAFY 219 388 IPR038276 -
Tsu07g01191 396 PANTHER PROTEIN LEAFY 1 396 IPR002910 GO:0003677|GO:0006355
Tsu07g01191 396 Pfam Floricaula / Leafy protein SAM domain 50 127 IPR035079 -
Tsu07g01191 396 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 217 382 IPR035209 GO:0003677
Tsu07g01191 396 Coils Coil 175 195 - -
Tsu07g01191 396 MobiDBLite consensus disorder prediction 146 169 - -
Tsu07g01191 396 MobiDBLite consensus disorder prediction 182 226 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01191 1 390 Orphan Transcription Factor Family AT5G61850 65.441 7.80e-161 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Tsu07g01191 C_LFY_FLO 7.9e-110 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01191 - - gmx:100798196 624.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01191 07 10174806 10177676 Tsu07g01191 07 10174806 10177676 ECH