Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01179 ATGGGGATAGTAAATGTAAATGAAACATTATTTTCATcagttgaaattttaaatattgcaGATATATCCTCCAATATGAATCTTAATACACTTTATAAGGTTTGCATTACTGTCCCACCCAATATTCTCTCTGATGGCATATGGGGTGTGCATAAATCCCAAATGACTCCATTCAAGTGCTCTTTACCAATGTTCCTTCTTCAAATTGTTCTAATTTATACCACAACAAGACTTTTAAATTTTCCTATCAAGAAGTTGGGTTTACCCATCCTCTTTTCACAAATGATGGCTGGGCTAGTTTTAGGACCAATGGTGCCGGTATTTGAGGAGTACAAGAGGAAGTTGTTTCCTTATGGAAGTCAAGATACACTTGCATCGATAACAGGACTTGGTTATGTGTTATTCCTATTTGAAACTGGTATAAAAATGGATTTTCACACGATCATGAGAACGGGAAGAAAAGCATGGGTGATTACGTTTTTCGGGTTAGTAACCCCGATTATATTTGGTTTTGCTACCCGAAATGTAAAGATTATGGATTATTTTAGCAACAGTCCCCTTGAAGCAAATATAATAATGGTAGGACACAATACAACTTCATTCGCCGTGATTGTTGCTCTCTTAAATGACCTTGAACTTCTAAACTCCGAACTTGGACGATTAGCATTATCTGTTTCTTTGATTGGTGACCTATTGAGTAACATTGTTGTAACTATGTCCTCAACTATGGTGAGTTCGAGTAGTCATATTCCATTTGGCGTGAGATTAGGATCTTTAGTCGGCATAGCTATCTTCATTTTGTTCATCTATCGTCCCACGATGCTTTGGATTGTTGAACACACTCCTGAAGGAAAAGAAGTTAAGGATACTTACGTCAACATTGTTATTGggattttgtttggtttgtgtTGGTTTTCAGGTTACCTAGAAAGAGGACCTatctttttaccttttatttttggattggCTACCCCCGAAGGACCTCCATTAGGATCTACATTGATTAAACGAGTTCATTTGTTAGGCATAAAATTGTTATTGCCAATTTTTATGACTACTAGTACAATGAAAGTAGAATATGGCTTTTGGAATTCATCATCAGCATCAACACTTGATGTATTtttgtatgttttatttttgggttatTTGGTCAAAATTGTAGCATGTTTTATATGTTCACTCTATTTCAACATGCCTCCAAAGGATGCTATCTCTCTTTCCCTACTTTTGAACTGCAAAGGTGTTGTGGAAGTAACCATGTACTCTACCGCATTGGATAGAAATGATATCCTTTCCAAAACATATTGTGTGATTATACTGATAATCATGGTTTCAATTTGCACAACTCATTTGCTGGTAAAACGTTTGTATGATCCTTCAAGAAAATATGCTGGTTACCAAAAGAGAAACTTATTCAATTTGAAACACCACTCAGAATTGAAGATACTAGTTGTCATACATAAACAACATCATGTAACTCCTATCACCGAAGTAATCGATCTATGTCACCCTATAGTCGAACATCCTATCACCGTAGACGCGTTGCATTTAATCGAGTTAGTTGGAAGATCCTCACCTATTTTCATTTCtcacaagaagaagaaagttgTTTCTTTAAACTTGCATGATTCTTACTCAGATAGTGTTGTTCTTAATCTCAAACTATATGAACATGATAAAGAAGGTGCAGCAATAATAAATCCTTACACTGCCATATCTCCACTGAATTTGATGCATGAAGATGTTTGTCACTTAGCATTTGACAAACTTTCATCAATTATAATTCTTCCTTTTCATAAAAAATGGTTAAGTGATGGTAAGCTTGAATATGATGACATAAACATAAGGTCTTTAAATTGCTCAGTCTTGGAAAAATCTCCATGTTCAGTTGGAATCCTAGTGACTCGCGGTATTCGTCTAACGGATTCAATATTTCGATTAGCTTTGGTATTTTTAGGTGGAAGAGATGATAGAGAGGCTTTATGTTTAGCGAATCGGGCAGCACAAGACCCTAGTGTTGAGCTTGTGGTATATCACATTGTAGACAAGAAGAGAACTTTACAAGACATGGAAAATTTGGAAACAAGGTTTGATATAGCAATGTTAAAAGATGGTAAGATATCACATTATGGATTTGAAAATGTAGAATATAAAGAAATTGAAGTTGAGGGTGGATCACAAACAATTGATGTTCTAAGACAAATGGTTGAAGAACATGATTTTATTATAGTTGGAAGAAGACAAGGAATCAAATGTCCACAAACATCTGGGCTTCAAGAATGGAGTGAGTTTCCTGAGTTAGGTCCTGTTGGAGATTTTTTGGCTTCATCAGATCTTGATTGCAAAGCTTCTGTTTTAGTTGttcagcaacaacaacaaatatgCATGTAG 2391 0.3375 MGIVNVNETLFSSVEILNIADISSNMNLNTLYKVCITVPPNILSDGIWGVHKSQMTPFKCSLPMFLLQIVLIYTTTRLLNFPIKKLGLPILFSQMMAGLVLGPMVPVFEEYKRKLFPYGSQDTLASITGLGYVLFLFETGIKMDFHTIMRTGRKAWVITFFGLVTPIIFGFATRNVKIMDYFSNSPLEANIIMVGHNTTSFAVIVALLNDLELLNSELGRLALSVSLIGDLLSNIVVTMSSTMVSSSSHIPFGVRLGSLVGIAIFILFIYRPTMLWIVEHTPEGKEVKDTYVNIVIGILFGLCWFSGYLERGPIFLPFIFGLATPEGPPLGSTLIKRVHLLGIKLLLPIFMTTSTMKVEYGFWNSSSASTLDVFLYVLFLGYLVKIVACFICSLYFNMPPKDAISLSLLLNCKGVVEVTMYSTALDRNDILSKTYCVIILIIMVSICTTHLLVKRLYDPSRKYAGYQKRNLFNLKHHSELKILVVIHKQHHVTPITEVIDLCHPIVEHPITVDALHLIELVGRSSPIFISHKKKKVVSLNLHDSYSDSVVLNLKLYEHDKEGAAIINPYTAISPLNLMHEDVCHLAFDKLSSIIILPFHKKWLSDGKLEYDDINIRSLNCSVLEKSPCSVGILVTRGIRLTDSIFRLALVFLGGRDDREALCLANRAAQDPSVELVVYHIVDKKRTLQDMENLETRFDIAMLKDGKISHYGFENVEYKEIEVEGGSQTIDVLRQMVEEHDFIIVGRRQGIKCPQTSGLQEWSEFPELGPVGDFLASSDLDCKASVLVVQQQQQICM 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01179 796 Pfam Sodium/hydrogen exchanger family 69 452 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tsu07g01179 796 PANTHER CATION/H + ANTIPORTER 25 794 - -
Tsu07g01179 796 Gene3D - 63 464 IPR038770 -
Tsu07g01179 796 PANTHER CATION/H+ EXCHANGER 3 25 794 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01179 Tsu-Chr7 10071585 10074559 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01179 34 788 Antiporter Super Family AT3G44900 33.541 2.11e-137 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01179 - - mtr:MTR_3g498715 1130.93