Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01177 ATGACAAAACCAACACCAATCATTAACCAAAACCAGGGTAAAGAGCAGTTGGATTCTGAGGGATCATCATCGCCTCTAACGGTTACTTCCCGGGTTTTGTATATGTTGGGAGACATCACTGCAGGGCCTGCACATATGTTCACTCAATGGCTTCAATCTGTTCGAAAACGCGCTTCCAATCATCGCTCCTCTGGATTCCCTCGCTCTTCTTCCACTATGACGCCCTTTTGTTTTGGAGAATCTGCAGAGGATGCAAAAATGGATGACATGCCTGATCAAACTGAAAGTAGTTTGTGGGATAGGCTTGGTAAAGCTGAAATGTTGGACATTGAATCGAGTTCCTTTTCTTGGGATATGCTCTCTTCACTTCACCACACTGAGCATACTAGTAGCAATGAACATTCCGAAGATGAAATGAATAGAGCTCTTGAGCTAACAGTAAATTCTGGAGGAGTTGTCTTCTTTGCCCTTTTCAATGTCCATGGGAGTGATGATGCATCTCCAAAAGAAGCAGCAGCTGTCATAAAGATATCTTCGTCAAGAATGGCAACACAGTCCGAACGTCTCGGATATGAATTTGCCAAGTGGTTGGGAGTCCAAACGCCACAGGCTAGAGTCATTCACAATACCAGTTTAGAATGGCTCCAAATAAAGGAAGCTGCAGAAAAAGCAAGGGATATAGCAAGATGTGAGCGTGATGCAATTGGTGAAACTACATGTTCAGAACTTTTGGAAGCACTTGAACTTAGCCGGTGTCTCTTGTTTCTAAGTTATGTACACGGTTCACCTTTGCTTGAAAGCTGTAGCGCATTTGAATCACGGGATTCTGCAGAAACAGTATCAGCAGCCCTTGGCAGGGTATTGATGCTAGATCTTGTTATCAGAAATGAAGATAGGCTTCCATGCCGTCAACTTAGATGGCGTGGGAACCCTGCCAATTTGTTATTGGCTGACAAGACAATCTCTTCAAATTTAGATACAATAGGAGAAGCCTTTGATTTTGAAATGAACCGATATGGGCCCGGGGTGGTTGGGACGCTTCAGAAAGAACGAAGGACTTCAGTAGATAGCAGATCGAGTTCTCTCAATCATGGAAAAAGATCACAAGGCTCTCTTCTTTCACAGATAAGTGAATCATCTGATGACATGTGCCTTAAAAGTCAAATGTCAGGAGAAACAATGTTTACTGGCTCCAAGATTGTGGCTATTGACTCTGGTGTTCCTCGTCGACCCCCTGCTGGTAAACGTGCAGATGATCAGGTCAATTATCCTAAGTTGGTTGAGTTAGTACTAAATAGCTCTGAATTTTCCTCTTGCTTGTTATATGATATAACTGGAGGGAAATTAGGAAGTCCTCCCTTAGAAGACATAAATACAACAGTCGATGTACAAGGAAGTGAAGTAACATCAATAGTTCATGAGTTCCGCAGTGGTTTTCGTGCTGCTCTTAGGGATCTGCAAGGATTTCATATATTCCTACTTACACTTCACAAAAAACTTGATAATGTGTTACGATCATTTAATAATACTATAAGCAAAATACCATTGGGGGACTCTGAAAAAGAAGATTCACCTTCACCCGCTGCTGGTAGTTGTCTCTCTCCAACAAGTAAGGAGAGACTTTGTAATGACAGCCATCGAGATTTGAGTGATACAGATTCACAGAGATCTGCTCCAAGGGCATCACCATCTTCAGGCAATAGAGATTTTTGTGACTCTGCTTCTCCTATGTCAAGAGAAGGTTGGCATGGAAAATCCTCTAAAGGAAGCGTGGAGCCATTGCTTGGTTCCCGTTTTACAGCTAAGCTCCGCGACTTTCATAAATTTGCCAAGGTTGATGCAGAATCTTATAAAGAATTGGAACACTGGAATGAAATGCTTAAAAATGATGCTATCAAGTTTTGCCAGGAGAACAATTTCAATTCAGGATTTTTTGAGGGTAGTGATAGCAACACTGTTGTTGATGCATATGAATTGAAGGTCAGACTTGAGCATATCCTTGAAAGGATTACATTGATATCTGAGGCTGCAAATACAGAGAGACCATCTGCTGTTACAAGTAATTTGTTCATCGGTGGAGCACAGTCTGCAAGATCTGTATACACAATGCAACACTTGGGAATCACTcatattttgtgtttgtgtaCTAATGAAATTGGACAATCAGATTCTCAATTTCCTGATCTGTTTACTTACAAAAATTTCTCGATCTGTGATACTGAGAATTCTGACATCGGCGTCTTATTTGACGAAGCTTGTGATTTTATAGAAGATGTTGAGAAAGGAGGTCAGAGAGTTTTAGTTCATTGCTTCGAAGGGAAAAGCAGAAGTGTCACTGTGCTCCTTGCTTACTTGATGCTCAGAAAGAACTTCACGTTATTAGAAGCATGGAATGCTATGAGAAAAGTTCACCGTCGAGCGCAACCTAATGATGGTTTTGCAAAGATCTTACAAGAACTTGATCAAAAACTGCACGGGAAAGTTTCGATGGAGTGGCAGCGGCGGAAACCAACAATGAAAGTTTGTCCTATATGTGGCAAGAATGCTGGACTGAGCAGCAGCTCACTTAAGCTACATCTTCAGAAGTCTCATAAAAGGCTATCATCAGGGAGTGTAGATAGTGCCATGACAATGGAAATCCAAAAGGCATTAACCACTTTGAATATTAGCCGTGGTGGGAGTGTGAGCCCCAAACAAAGGCAAACTCATTCAATGACAGACTAa 2724 0.4148 MTKPTPIINQNQGKEQLDSEGSSSPLTVTSRVLYMLGDITAGPAHMFTQWLQSVRKRASNHRSSGFPRSSSTMTPFCFGESAEDAKMDDMPDQTESSLWDRLGKAEMLDIESSSFSWDMLSSLHHTEHTSSNEHSEDEMNRALELTVNSGGVVFFALFNVHGSDDASPKEAAAVIKISSSRMATQSERLGYEFAKWLGVQTPQARVIHNTSLEWLQIKEAAEKARDIARCERDAIGETTCSELLEALELSRCLLFLSYVHGSPLLESCSAFESRDSAETVSAALGRVLMLDLVIRNEDRLPCRQLRWRGNPANLLLADKTISSNLDTIGEAFDFEMNRYGPGVVGTLQKERRTSVDSRSSSLNHGKRSQGSLLSQISESSDDMCLKSQMSGETMFTGSKIVAIDSGVPRRPPAGKRADDQVNYPKLVELVLNSSEFSSCLLYDITGGKLGSPPLEDINTTVDVQGSEVTSIVHEFRSGFRAALRDLQGFHIFLLTLHKKLDNVLRSFNNTISKIPLGDSEKEDSPSPAAGSCLSPTSKERLCNDSHRDLSDTDSQRSAPRASPSSGNRDFCDSASPMSREGWHGKSSKGSVEPLLGSRFTAKLRDFHKFAKVDAESYKELEHWNEMLKNDAIKFCQENNFNSGFFEGSDSNTVVDAYELKVRLEHILERITLISEAANTERPSAVTSNLFIGGAQSARSVYTMQHLGITHILCLCTNEIGQSDSQFPDLFTYKNFSICDTENSDIGVLFDEACDFIEDVEKGGQRVLVHCFEGKSRSVTVLLAYLMLRKNFTLLEAWNAMRKVHRRAQPNDGFAKILQELDQKLHGKVSMEWQRRKPTMKVCPICGKNAGLSSSSLKLHLQKSHKRLSSGSVDSAMTMEIQKALTTLNISRGGSVSPKQRQTHSMTD 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01177 907 Pfam Actin-fragmin kinase, catalytic 95 334 IPR015275 -
Tsu07g01177 907 SMART dsp_5 681 823 IPR020422 GO:0006470|GO:0008138
Tsu07g01177 907 Pfam Dual specificity phosphatase, catalytic domain 690 822 IPR000340 GO:0008138|GO:0016311
Tsu07g01177 907 MobiDBLite consensus disorder prediction 346 374 - -
Tsu07g01177 907 CDD DSP 682 819 - -
Tsu07g01177 907 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 23 907 IPR035010 GO:0004721|GO:0009737|GO:0043622
Tsu07g01177 907 MobiDBLite consensus disorder prediction 358 374 - -
Tsu07g01177 907 MobiDBLite consensus disorder prediction 1 24 - -
Tsu07g01177 907 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 23 907 - -
Tsu07g01177 907 MobiDBLite consensus disorder prediction 514 590 - -
Tsu07g01177 907 Gene3D - 264 516 IPR036940 GO:0016301
Tsu07g01177 907 ProSiteProfiles Dual specificity protein phosphatase domain profile. 681 826 IPR020422 GO:0006470|GO:0008138
Tsu07g01177 907 MobiDBLite consensus disorder prediction 555 572 - -
Tsu07g01177 907 SUPERFAMILY Protein kinase-like (PK-like) 49 420 IPR011009 -
Tsu07g01177 907 MobiDBLite consensus disorder prediction 540 554 - -
Tsu07g01177 907 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 681 826 IPR029021 -
Tsu07g01177 907 Gene3D Protein tyrosine phosphatase superfamily 664 836 IPR029021 -
Tsu07g01177 907 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 750 802 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01177 Tsu-Chr7 10053450 10059018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01177 18 892 Protein tyrosine phosphatase (PTP) family AT5G23720 63.087 0.0 1056
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01177 K14165 - gmx:102661225 1245.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01177 07 10053450 10059018 Tsu07g01177 07 10053450 10059018 ECH