Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01172 ATGGCAATAATTACTATGCTATTTCTTCATCTAACTTTTTTCATCTTCAAAgtgttttctttctcttctcattCTCATGCagataaaattgttactcttCCTGGACAACCACAAATAGCCTTTCAACAATTCTCAGGCTATGTCACAGTTgataacaaaaaacacaaatcaCTTTTTTACTATTTTGCTGAATCAGAAACTGATCCATCTTCAAAACCTCTTGTTCTTTGGCTTAATGGAGGACCTGGTTGTTCTTCTCTAGGAGTAGGTGCATTCTCAGAAAATGGACCCTTTAGACCAAATGGTGAATTTCTTATTAAAAATGAACATAGTTGGAATAAAGAGGCAAATATGCTTTATTTAGAGACACCAATTGGAGTTGGATTTTCCTATTCCAAAGGTAGTTCTGCTTATACAACAACAGTGAATGACGAGGAAACAGCAAGGGACAATCTTGTATTCTTGCAACGTTGGTTCAACAAGTTTCCACAATATAGAAACAGAGATTTGTTTCTAACTGGTGAAAGTTATGCAGGTCATTATATTCCTCAACTTGCAAAGCTTATGATTGAAATGAACAAAAGAAACAAGATATTCAATCTCAAAGGCATAGCTTTGGGGAATCCTGTGCTAGAATATGCTACTGATTTCAATTCAAGGGCTGAGTTTTTTTGGTCACATGGACTAATATCAGATGCAACTTTTAACATGTTCACTACAGTGTGTAATTACTCACGTTATGTAAGTGAGTACAATAGAGACTCAGTTTCATCTCTTTGTTCAAAGGTTATGGGATTGGTGAGTAAAGAAACTAGTAGATTTGTGGATAAATATGATGTCACTCTTGATGTTTGTATTTCCTCTGTGCTGTCACAATCCAAGATTATTTCTCCTCAGCCTCAACAAGCAAATGAGATGATAGATGTATGTGTGGATGATAAGGTTACAAACTACTTAAACAGGAGAGATGTGCAAGAGGCACTTCATGCAAAGCTTGTCGGAGTTCGCAAGTGGGATGTATGCAGCAATGTTCTGGACTATGATGTGCTTAACTTGGAAGTGCCAACACTTCCTGTTGTTGGATCATTGATAAAAGCTGGAGTTAGGGTCCTAATTTACAGTGGTGATCAAGATTCAGTGATTCCACTGACTGGAAGCAGAACCTTAGTTCAAAAATTGGGTAGACAATTAGGACTGAATACAACAGTACCTTACAGAGTATGGTTTGAAGGCCAGCAgGTTGGTGGATGGACTCAAGTTTATGGCAATATTCTCTCATTTGCCACTGTCAGAGGTGCTGCACATGAAGCTCCTTTCTCACAGCCTGAAAGATCACTTGTGCTATTCAAATCATTCTTGGAAGGAAGCCCTTTACCTGAACTTTTCTGA 1389 0.3636 MAIITMLFLHLTFFIFKVFSFSSHSHADKIVTLPGQPQIAFQQFSGYVTVDNKKHKSLFYYFAESETDPSSKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEFLIKNEHSWNKEANMLYLETPIGVGFSYSKGSSAYTTTVNDEETARDNLVFLQRWFNKFPQYRNRDLFLTGESYAGHYIPQLAKLMIEMNKRNKIFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDATFNMFTTVCNYSRYVSEYNRDSVSSLCSKVMGLVSKETSRFVDKYDVTLDVCISSVLSQSKIISPQPQQANEMIDVCVDDKVTNYLNRRDVQEALHAKLVGVRKWDVCSNVLDYDVLNLEVPTLPVVGSLIKAGVRVLIYSGDQDSVIPLTGSRTLVQKLGRQLGLNTTVPYRVWFEGQQVGGWTQVYGNILSFATVRGAAHEAPFSQPERSLVLFKSFLEGSPLPELF 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01172 462 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 23 460 IPR001563 GO:0004185|GO:0006508
Tsu07g01172 462 SUPERFAMILY alpha/beta-Hydrolases 32 459 IPR029058 -
Tsu07g01172 462 Gene3D alpha/beta hydrolase 22 458 IPR029058 -
Tsu07g01172 462 ProSitePatterns Serine carboxypeptidases, serine active site. 172 179 IPR018202 GO:0004185
Tsu07g01172 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 108 120 IPR001563 GO:0004185|GO:0006508
Tsu07g01172 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 121 131 IPR001563 GO:0004185|GO:0006508
Tsu07g01172 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 183 IPR001563 GO:0004185|GO:0006508
Tsu07g01172 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 425 438 IPR001563 GO:0004185|GO:0006508
Tsu07g01172 462 PANTHER CARBOXYPEPTIDASE 23 460 - -
Tsu07g01172 462 Pfam Serine carboxypeptidase 35 455 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01172 Tsu-Chr7 10041153 10044956 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01172 318 458 Calmodulin-binding Proteins AT2G22960 29.078 5.83e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01172 K16297 - gmx:100795668 811.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01172 07 10041153 10044956 Tsu07g01172 07 10041153 10044956 ECH