Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01165 ATGGGTTGCGTGCTTGGAACACCGGCCGGTGACGGAGATCAACGCCGTCACCGGAAAGATCAACGTAACGGTTCTTCTGAAGTAGTTAATAATGTCGTTACGGTTCGTGAGAAGCAAAAACATCGTCACACCGGAGATTTTCCGGGGACTCTTCCGGCGATAGAGCGTCGGAAACCTATACTCGATCCACTTGCGGTAAATCAACAAGGTTGGCCGTCTTGGTTGATGGCTGTCGCCGGTGAAGCTATCGGCGATTGGACTCCTCGCCGTGCCAATACGTTTGAAAAACTTTCTAAGATTGGGCAAGGGACATATAGTAATGTGTATAAAGCAAGAGATTTAGTTACAGGGAAGATAGTGGCTTTGAAGAAAGTGAGATTTGATAATTTGGAACCAGAAAGTGTGAAATTTATGGCAAGAGAGATACTTGTTATGAGAAAACTTGATCATCCAAATGTGTTAAAGCTTGAAGGATTGGTTACTTCAAGAATGTCATGTAGTCTTTATTTGGTATTTGAGTATATGGAACATGATCTTGCAGGACTTTCAGCTAGTCAAAGTGTTAAGTTTACTGAACCACAGGTCAAATGCTTTATGAAGCAATTACTTTCCGGTCTTGAGCATTGCCACAGTCGAGGCGTATTGCATCGTGATATCAAGGGTTCCAATCTGCTTATTGACAATGAAGGAATCCTAAAAATTGCAGATTTTGGACTGGCAACTTTCTATAATCCTAATAAAAAACAGTGCATGACAAGCAGAGTTGTGACACTTTGGTATCGACCCCCTGAGCTTCTTCTTGGGGCTACATTTTATGGTGTAGGTATTGACCTTTGGAGTGCGGGTTGCATTTTGGCAGAGCTACTTGCTGGGAAGCCAATCATGCCTGGCCGAACAGAGGTTGAACAACTGCACAAAATTTTTAAGTTGTGTGGCTCTCCTGCTGAGGAATATTGGAGGAAGCATAAATTGCCAAATGCTACAATCTTTAAGCCACAGCAGCCATATAAACGTTGTATCTCAGAAACATTCAAGGATTTTCCTCCATCTTCACTTCCTCTAATTGAAACTCTTCTTGCAATAGATCCTGACCGTCGTGGCACTTCCTCAGCTGCTCTAAATCATGAAGTAAGTGATCCTTGTGGATTAACCTTATATTTGAGAATTTAG 1170 0.4239 MGCVLGTPAGDGDQRRHRKDQRNGSSEVVNNVVTVREKQKHRHTGDFPGTLPAIERRKPILDPLAVNQQGWPSWLMAVAGEAIGDWTPRRANTFEKLSKIGQGTYSNVYKARDLVTGKIVALKKVRFDNLEPESVKFMAREILVMRKLDHPNVLKLEGLVTSRMSCSLYLVFEYMEHDLAGLSASQSVKFTEPQVKCFMKQLLSGLEHCHSRGVLHRDIKGSNLLIDNEGILKIADFGLATFYNPNKKQCMTSRVVTLWYRPPELLLGATFYGVGIDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPAEEYWRKHKLPNATIFKPQQPYKRCISETFKDFPPSSLPLIETLLAIDPDRRGTSSAALNHEVSDPCGLTLYLRI 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01165 389 CDD STKc_CDK9_like 94 376 - -
Tsu07g01165 389 MobiDBLite consensus disorder prediction 1 27 - -
Tsu07g01165 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Tsu07g01165 389 ProSiteProfiles Protein kinase domain profile. 94 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01165 389 ProSitePatterns Protein kinases ATP-binding region signature. 100 123 IPR017441 GO:0005524
Tsu07g01165 389 Gene3D Phosphorylase Kinase; domain 1 81 176 - -
Tsu07g01165 389 PANTHER CELL DIVISION PROTEIN KINASE 44 376 - -
Tsu07g01165 389 Pfam Protein kinase domain 94 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01165 389 PANTHER F21B7.34 44 376 - -
Tsu07g01165 389 SMART serkin_6 94 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01165 389 SUPERFAMILY Protein kinase-like (PK-like) 88 376 IPR011009 -
Tsu07g01165 389 Gene3D Transferase(Phosphotransferase) domain 1 177 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01165 Tsu-Chr7 9948076 9951611 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01165 86 380 Core Cell Cycle Gene Families AT5G10270 52.396 1.21e-104 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Tsu07g01165 Pkinase 1.3e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01165 K08819 - gmx:100793033 683.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01165 07 9948076 9951611 Tsu07g01165 07 9948076 9951611 ECH