Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01162 ATGGAAAAGATAAAGTTTGTGAAAAATGGAGTAAGCAATAAATTGCCTCCTGGTTTTCGTTTTCAGCCGACAGACGAAGAGCTTGTCTTTCAGTACTTGAAATGTAAAACCTTCTCATATCAGTTGCCAGCTTCAATCATTCCTGAGATCAATGTCTGCAAGTATGATCCTTGGGATTTGCCAGGAAATCATGGTGAGCAAGATATGTATTTCTTCAGTGCTAAGGAAGCCAAGTATCGAAATGGCAACCGCATGAACAGATCAACAAACTCTGGATATTGGAAGGCGACAGGATCAGATAAGAAAGTTAGTGTTTCTTCATCAATAAGTAATGAAGGAATTGCGGGGATAAGAAAAAGTCTTGTATTTTATAAAGGAAAATCACCAAATGAAACTCGAACGCATTGGATCATGCATGAATATCGTCTAGTTAGTGTAGAAACTAATCCTTGTAATCAGACTTTCTATGGGAACGAAATAGGGGATTGGGTTCTGTGTCGTATATTCATGAAGCAAAGAAGTAATGTATCGATGATGAATACCAATGTTGACGCAGCTCAGCCAAAATTCTTTGATTTTATGATGGTACACAACTTGTCAGCTCCGGACCCTACTACACATTTTTCTTCATCCTCGTCTTGTTCAAGTTCCGGTGAAGTCTCTTCATCTGGAGAAAGATGA 681 0.3862 MEKIKFVKNGVSNKLPPGFRFQPTDEELVFQYLKCKTFSYQLPASIIPEINVCKYDPWDLPGNHGEQDMYFFSAKEAKYRNGNRMNRSTNSGYWKATGSDKKVSVSSSISNEGIAGIRKSLVFYKGKSPNETRTHWIMHEYRLVSVETNPCNQTFYGNEIGDWVLCRIFMKQRSNVSMMNTNVDAAQPKFFDFMMVHNLSAPDPTTHFSSSSSCSSSGEVSSSGER 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01162 226 SUPERFAMILY NAC domain 12 171 IPR036093 GO:0003677|GO:0006355
Tsu07g01162 226 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 224 - -
Tsu07g01162 226 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 224 - -
Tsu07g01162 226 Pfam No apical meristem (NAM) protein 16 143 IPR003441 GO:0003677|GO:0006355
Tsu07g01162 226 ProSiteProfiles NAC domain profile. 15 171 IPR003441 GO:0003677|GO:0006355
Tsu07g01162 226 MobiDBLite consensus disorder prediction 204 226 - -
Tsu07g01162 226 Gene3D NAC domain 24 176 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01162 Tsu-Chr7 9921988 9922927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01162 1 194 NAC Transcription Factor Family AT5G13180 51.364 1.54e-67 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tsu07g01162 NAM 7.1e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01162 - - aprc:113868555 298.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00529 02 4483614 4485316 Tsu07g01162 07 9921988 9922927 ECH
Tsu07g01162 07 9921988 9922927 Tsu07g01162 07 9921988 9922927 ECH