Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01153 ATGAAACTGAGTATGATGAGTCTACATATTGGAGATAGTGATAACATTATTGGCCGCACCACATATTCAGGTTTGTACGCGATCATGACGAACACAAACATCATCTCTACAACTGAGCTTAATGTAAAGCAAGGAGAACCAATTCGAGTTCAACCCGCGGAAGAAACAGAAAAGGGACTTTACTTTCTTTCAAATCTCGATCAGAATATCGCGGTTCCAATGCGCACAATTTATTGCTTTAAATCAGAAACAAGAGGAAATGAAAAAGCAGCACAAGTTATTAAAGATGCTTTGTCAAAAATTCTTGTCCCTTATCATCCTATGGCAGGAAAGTTGATTATAAGCACTGAAGGGAAGTTGATAGTGGATAACACAGGGGAAGGTGCAGTATTTGTTGAAGCTGAAGCAGATTGTAGCATAGATGAAATTGGTGACTTAACAAAACCAGATCCTCATAGGCTTGGGAAATTGGTTTATAATACACCAGGTGCTAATAATATATTAGAGATGCCTCTTATGACTGTTCAGGTGACAAAGTTCAAATGCGGAGGATTCACTTTGGGACTAAACATGATCCATTGCATGAAAGATGGACTATGTGCAATGGAGTTTGTGAATGCATGGGCTGAAACAGCTAGAGGTTTAGACTTAAAAGTTCAACCATTTCTCGATCGAACCATACTCAAATCGCGCAACCCTCCCAAAATAGAATTCCAACACCACGAATTCGACCAACTAGAAGATCTATCAAACAGCGAAAAAATCTACGAAGGAGAGAAAATCATCCACAAATCCTTCTTTTTCAATCCAGAAAAGCTCGATTCGCTCAAGAAAAAGGCGATAGAAGAcggagttttaaaaaaatgttcaacTTTTGAAGCACTCTCGGCTTTTGTATGGAGAGCTAGAACTTTGGCTTTAAAAATGCATCctaatcaacaaacaaaattaCTCTTCGCAGTTGATGGACGATCGAGATTCGTTCCGCCAATACCAAAGGAATATTTTGGCAATGCTATTGTGCTAACAAATTCTTTGTGTAAAGCAAGTGATTTATTGGACAATCCTCTTTCGTTTTCGGTTGGATTGGTTCACAAGGCAATTGAAATGGTTACAGATAGTTATATGAGATCAGCTATTGATTATTTTGAGGTAACAAGAGCTAGACCTTCCTTAACAGGAACACTTTTGATTACAACATGGACTAAATTGTCTTTTGACACTACTGATTTTGGTTGGGGTGAACCTTTATGTTCTGGTCCTGTTACATTGCCTGATAAAGAAGTTATTTTGTTCTTGTCACATGGTCAAGGAAGGAAAGGTATAAGTGTGCTTCTTGGTTTGCCTGATTCTGCTATGAAACGTTTTGAAGAATTGGTGATTAATATTGTGTGA 1395 0.3713 MKLSMMSLHIGDSDNIIGRTTYSGLYAIMTNTNIISTTELNVKQGEPIRVQPAEETEKGLYFLSNLDQNIAVPMRTIYCFKSETRGNEKAAQVIKDALSKILVPYHPMAGKLIISTEGKLIVDNTGEGAVFVEAEADCSIDEIGDLTKPDPHRLGKLVYNTPGANNILEMPLMTVQVTKFKCGGFTLGLNMIHCMKDGLCAMEFVNAWAETARGLDLKVQPFLDRTILKSRNPPKIEFQHHEFDQLEDLSNSEKIYEGEKIIHKSFFFNPEKLDSLKKKAIEDGVLKKCSTFEALSAFVWRARTLALKMHPNQQTKLLFAVDGRSRFVPPIPKEYFGNAIVLTNSLCKASDLLDNPLSFSVGLVHKAIEMVTDSYMRSAIDYFEVTRARPSLTGTLLITTWTKLSFDTTDFGWGEPLCSGPVTLPDKEVILFLSHGQGRKGISVLLGLPDSAMKRFEELVINIV 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01153 464 Pfam Transferase family 49 458 - -
Tsu07g01153 464 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 41 460 - -
Tsu07g01153 464 Gene3D - 245 462 IPR023213 -
Tsu07g01153 464 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE 41 460 - -
Tsu07g01153 464 Gene3D - 41 244 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01153 Tsu-Chr7 9825614 9830941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01153 50 463 Monolignol Biosynthesis Gene Families AT5G48930 35.417 1.37e-83 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01153 K15400 - gmx:100794490 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01153 07 9825614 9830941 Tsu07g01153 07 9825614 9830941 ECH