Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01112 ATGCCGATCATCAGAAGCATCACAAGAGAATATATTGGCAAGCCATTAAGATGCAAAGCTGCAATATGCAGAAAATCAGGTGAACCTCTAGTTATAGAGGAAGTTGAATTAGACCCACCTAAATCATGGGAAGTACGGATCAAAATTTTATGCACATCTCTTTGCCACAGTGATCTTACCTTTTGGAAAATGGATCCTTCGGTACCTGCTGCCGTGTTTCCTAGGATTCTAGGACACGAAGCCGttggAGTTGTGGAAAGTGTAGGGGAGCATGTGGAAGAAGTGAAAGAAGGCGAGTTAGTGGTGCCGGTGTTTCTCGCAAACTGTGGAGAATGCAGAGACTGTGAAAGCACAAAAAGCAACAATTGCACTAAGTTTGGGAGCAAACCATTCCAACATGGTATGCCAAGAGATGGAACAAGCCGGTTTAGGGACATGAATGGAGAAGTGGTGCATCATCTTTTGTGTGTAAGCAGCTTTTCTGAGTATACTGTGGTGGATGTGACACATTTGgttaaaattgaacaaaattttcCTCTTGATAAGGCTTGCTTGCTCAGTTGCGGTGTTTCCACAGGGGTAGGGGCAGCGTGGAAGGTGGCTGATGTAGAAAAAGGGTCCACAGTGGCTATTTTTGGGCTTGGTGCTGTAGGCCTAGCTATTGCTCTAGGAGCAAAACAAAGAGGAGCATCAATGATTATAGGTGTCGATGTAAATCAGGATAAATTTGAAATAGGAAAACAATTTGGAGTAACTGATTTCGTGAATCCCTCCACTTGCAAGGAGAAGTCGATCAGCGAGGTGATTAAGGATATGACAAATGGAGGAGCCGATTATTGCTTTGAGTGCATTGGCTTGGCATCACTAATGGTGGAGGCTTTCAATAGCAGCCGAGAAGGTTGGGGAAAAACAGTGATAATAGGGGTGGAAATGCATGGTTCACCATTGAATTTAAGTCCTTATGCCATACTAAAAGGCAGAACTATCACTGGATCACTATTTGGAGGTATCAAAGCAAAATCTGATCTTCCTCTCCTTGCTCAGAAGTACTTAGACAAAGAGCTTAACTTGGAGGGGTTCATAACACAAGAAGtggacttcaaagacatcaacaAAGCTTTTGATTATATGATCCAAGGAAAGAGCATTCGTTGCATTATAAGGATGGAtcattaa 1176 0.4133 MPIIRSITREYIGKPLRCKAAICRKSGEPLVIEEVELDPPKSWEVRIKILCTSLCHSDLTFWKMDPSVPAAVFPRILGHEAVGVVESVGEHVEEVKEGELVVPVFLANCGECRDCESTKSNNCTKFGSKPFQHGMPRDGTSRFRDMNGEVVHHLLCVSSFSEYTVVDVTHLVKIEQNFPLDKACLLSCGVSTGVGAAWKVADVEKGSTVAIFGLGAVGLAIALGAKQRGASMIIGVDVNQDKFEIGKQFGVTDFVNPSTCKEKSISEVIKDMTNGGADYCFECIGLASLMVEAFNSSREGWGKTVIIGVEMHGSPLNLSPYAILKGRTITGSLFGGIKAKSDLPLLAQKYLDKELNLEGFITQEVDFKDINKAFDYMIQGKSIRCIIRMDH 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01112 391 PANTHER ALCOHOL DEHYDROGENASE 9 389 - -
Tsu07g01112 391 Pfam Zinc-binding dehydrogenase 216 337 IPR013149 -
Tsu07g01112 391 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 179 352 IPR036291 -
Tsu07g01112 391 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 78 92 IPR002328 GO:0008270|GO:0016491
Tsu07g01112 391 SUPERFAMILY GroES-like 339 388 IPR011032 -
Tsu07g01112 391 Pfam Alcohol dehydrogenase GroES-like domain 44 174 IPR013154 -
Tsu07g01112 391 PANTHER ALCOHOL DEHYDROGENASE-LIKE 2 9 389 - -
Tsu07g01112 391 Gene3D - 193 332 - -
Tsu07g01112 391 Gene3D - 22 385 - -
Tsu07g01112 391 SUPERFAMILY GroES-like 13 198 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01112 Tsu-Chr7 9478318 9496273 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01112 44 350 Monolignol Biosynthesis Gene Families AT4G37990 27.742 5.29e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01112 K00121 - mnt:21395940 538.88