Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01103 ATGCATCTTCTCCTACTCACCGCATCACAACATGGCAATGGAGGTGGAAATCTGCTATCTCCCAAATCAATCCAATCCAAGTGGATATTTTTAAATCTGTTAGAAAACAAGATGGCGAGTTGCTTGACTGATTTGGCAAAGACATGTGTGGAGAAATTGATAAATGTGGCAATAGCAGAATCACGTCAAGTGTTTTGCTTCACTTGCATTGCTaatgaatttgaagaagaaaaggttaGGTTAGAAGCAGAAAGAAAAACTTTGGAGCAGCGTGCTAAAGTGGCAGTAGGAAGAGATAAAGATATTCAAGCTAATGTTCGTTTTGGGAAGAGGAAGGGAAAAGAGCTAGCAAATAAGACGGAGGAGATTAGACAATTAACAGAAAAGGGAGAGAAACTTGAAAATATTGAACTCCCTCGCCGTCTTTCAGATGTTGAACGTTATTCATCGGAAGATTACATTGCTTTTAAAAGCAGAGAGTCAAAATACAAAGAACTGTTAGATGCACTAAAAGATGACAACAACTATATAATCGGATTGCAAGGGATGGGAGGCACCGGAAAAACTACATTGGCCAAAGAAGTGGGTAAAGAGCTAAAGCAATCTGAACAATTCTCTCATGTCATCGATACAACTGTGTCGTTTACTCCTGATATAAAAAAGATTCAAGATGATATTGCTGGATCTTTAGGATTGAAATGGGAGGACTGTAATGACTCAGACCAACCCAAAAAACTATGGAGCAGATTAACAAATGGTGAGAAAATTCTTCTAATATTGGATGATGTCTGGGATCAGAATCCACCTCTTAATTTTGATCTGATAGGAATTCCAAAACGAGACAATCACAAAGGTTGCAGAGTTCTTATAACCACACGCAGTAAACGAATATTCAACAAAATGGGTTGTGATAAGAACATTGAATTGGAGCTCTTATCTGAAGAAGAATCATGGACCATGTTCAAAAGGTATGTCGGTATAAGTGATAgttcttcaaaaaaattgatcagTAAGGGACGCAAAATTGCTAAGGAATGCAAACGATTACCAGTTGCAATTGCAGTTATCGCCAGCAGTTTAAAGGGCCATCAACTTCGCAAGATTGAGTGGGACGTGACCTTAGAATCCTTGAAGAAGCCGCTGTCCATGCATGGTATTGATGACAATATGGTTGGAATTTATAAATGTTTGAAGTTTAGCTATGATTATCTGAAGGATGAAAAAGCCAAGGGATTGTTCCTCTTATCTTCTGTATTCCCAGAAGATAAAGAAATCCCTATTGAAATTCTAACTAGACTTGGCATTGGAACAGGCCTTTTTGGGGAAGATTATGGCAGCTACGAGCTACGATGA 1353 0.3747 MHLLLLTASQHGNGGGNLLSPKSIQSKWIFLNLLENKMASCLTDLAKTCVEKLINVAIAESRQVFCFTCIANEFEEEKVRLEAERKTLEQRAKVAVGRDKDIQANVRFGKRKGKELANKTEEIRQLTEKGEKLENIELPRRLSDVERYSSEDYIAFKSRESKYKELLDALKDDNNYIIGLQGMGGTGKTTLAKEVGKELKQSEQFSHVIDTTVSFTPDIKKIQDDIAGSLGLKWEDCNDSDQPKKLWSRLTNGEKILLILDDVWDQNPPLNFDLIGIPKRDNHKGCRVLITTRSKRIFNKMGCDKNIELELLSEEESWTMFKRYVGISDSSSKKLISKGRKIAKECKRLPVAIAVIASSLKGHQLRKIEWDVTLESLKKPLSMHGIDDNMVGIYKCLKFSYDYLKDEKAKGLFLLSSVFPEDKEIPIEILTRLGIGTGLFGEDYGSYELR 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01103 450 Pfam NB-ARC domain 164 402 IPR002182 GO:0043531
Tsu07g01103 450 PANTHER - 108 438 - -
Tsu07g01103 450 Gene3D - 311 405 IPR042197 -
Tsu07g01103 450 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 108 438 - -
Tsu07g01103 450 Coils Coil 116 136 - -
Tsu07g01103 450 PRINTS Disease resistance protein signature 177 192 - -
Tsu07g01103 450 PRINTS Disease resistance protein signature 250 264 - -
Tsu07g01103 450 PRINTS Disease resistance protein signature 346 360 - -
Tsu07g01103 450 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 414 IPR027417 -
Tsu07g01103 450 Coils Coil 71 98 - -
Tsu07g01103 450 CDD AAA 163 292 - -
Tsu07g01103 450 Gene3D - 129 308 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01103 Tsu-Chr7 9394178 9396826 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01103 178 440 WRKY Transcription Factor Family AT5G45050 27.174 1.66e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01103 - - cam:101507086 543.117