Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01097 ATGGCACTTGAAACTGTGGTTTACCCACAAGATCCATTTAATTATAGTTACAAAGATAATTACTTCAACTCATTAAGCAATGATTATGTTAGTGTTACTAATCTtcaagatgaagaacaagagaatGTTCTCCTAggaatcatcaacaacaacgttgaacaacaagaacaagaacaagaacaaagTATCCATGCAAATTGGGATTCTTGTTCTATTAAAGATCAATGGCCAGAATATTCACACACTTCATCTCCTGAAATCTGCACCGTTGATCAAACAATAACAGCACCTTCATTGCTTCTTCCTCATTCAGCTTCTACCACCACTATGGAAGATGCAACAGCAACAACTGCCACGTGTCGAAGAAAACGGCGTCGTATTAAGAGTGCAAAGAACAAAGAAGAGATTGAAAATCAAAGGATGACTCACATTACTGTTGAAAGAAATCGAAGGAAACAAATGAATGAATACTTGAATGTGCTTAGATCTTTGATGCCTTCTTCTTATGTTCAAAGGGGTGACCAAGCTTCAATTATTGGTGGAGCAATAAACTTTGTGAAAGAGTTAGAACAACTTTTACAATCTATGGGGGGCCAAAAGAAAACACAAGAGAATATAGGCTTAAATAATGGACCACCTTTTTCTGAGTTCTTCACTTTTCCACAGTACACAACAagtgcaacaacaacaacatctcagaacaccaacaataataatatggtCACAATGGAACAAAAACAATGGGCTGTTGCAGACATTGAAGTCACAATGGTAGATAGTCATGCCAATATGAAAATTATGTCTAAGAAAAAAACAGGACAACTTATGAAGATTGTTGTTGGGTTACAAAATCTTAGGCTTACAATTCTTCACCTTAATGTTACCACTTTGGATGATATGGTCCTTTACTCAATTAGTGTCAAGGTAGAGGAGGGGAGTCAGCTGAATAGTGTGGATGAAATTGCGGCTGCTGTGAATCAACTATTAAGGAAGGTCCAACAAGAACTGGATTATCAACTAAATTGA 1026 0.3255 MALETVVYPQDPFNYSYKDNYFNSLSNDYVSVTNLQDEEQENVLLGIINNNVEQQEQEQEQSIHANWDSCSIKDQWPEYSHTSSPEICTVDQTITAPSLLLPHSASTTTMEDATATTATCRRKRRRIKSAKNKEEIENQRMTHITVERNRRKQMNEYLNVLRSLMPSSYVQRGDQASIIGGAINFVKELEQLLQSMGGQKKTQENIGLNNGPPFSEFFTFPQYTTSATTTTSQNTNNNNMVTMEQKQWAVADIEVTMVDSHANMKIMSKKKTGQLMKIVVGLQNLRLTILHLNVTTLDDMVLYSISVKVEEGSQLNSVDEIAAAVNQLLRKVQQELDYQLN 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01097 341 PANTHER HELIX-LOOP-HELIX-LIKE PROTEIN 1 336 - -
Tsu07g01097 341 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 138 201 IPR036638 GO:0046983
Tsu07g01097 341 CDD bHLH_AtFAMA_like 141 204 - -
Tsu07g01097 341 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 138 189 IPR011598 GO:0046983
Tsu07g01097 341 SMART finulus 144 195 IPR011598 GO:0046983
Tsu07g01097 341 Pfam Helix-loop-helix DNA-binding domain 139 190 IPR011598 GO:0046983
Tsu07g01097 341 PANTHER MAX DIMERIZATION, MAD 1 336 - -
Tsu07g01097 341 Gene3D - 114 205 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01097 Tsu-Chr7 9351860 9354377 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01097 1 309 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 45.152 1.95e-74 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Tsu07g01097 HLH 1.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01097 - - gmx:100789380 364.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01097 07 9351860 9354377 Tsu07g01097 07 9351860 9354377 ECH