Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01091 ATGGCAAACCACTCTCTGATCGTCGGAATACGACGGTACAAAATTTTCCGCAGCAGCATCGGTTTTGTTTTGGGTGCACGAAATCTTCGGACCCATGCAGATTCTCGCTCTTCAGTATTTTCAGACAAACAGAACCTGAAGAGTCTAATTTCGGGATTCAAACCTTCAAGTCGGAATCCATTGCCGGTGCTTCAAAATTGGGTCGACCAAGGCAACAAACTTTCACCATCGGAACTGAGGCGCATCTCAAGAACCCTAATCAAATCCAAGCGCTACAACCACGCATTTGAGGTATTGAACTGGATGGAAAACCAACAAGAGTTCCGTATAAACCCAGCTGATCATGCTTTGAAATTGGAGTTAATCATTAAAAATTATGGGCTAATGGAAGCTGAAGAATATTTTATGAGTATACCTGACTCAGCTGGAAAGAAAGCCGCCTATCTCCCACTCCTATGTGGCTATGTAAAAGACAGGGACACCAGTAAAGCTGAGACTTTCATGGCGAAGCTCTATGAGCTGGGGCTAGTGGTGAACCCTCACCCTTATAATGAGATGATGAAACTATATCTTGCTACATGTGAGTACCGGAAGGTGCGCCTAGTTATCCAACAAATGAAACGAAATAAAGTACCCTGCAACGTTCTGTCCTACAACCTTTGGATGAATGCTTGTGATGAGGGAGAACGATATGGGGTTGCAGCAGTGGAAACGGTTTTTAGAGAAATGCAAAATGATGAGAATGTTGAGGTGGGATGGAGCAGTCTTGTTACTTTAGCCAATGTTTATATGAAAGCAGGACAATCTGAGAAAGCCATTCTAGTTCTCAAAAATGCTGAAGAGAAACTATCTAACTGCAACCGTCTTGGTTACTTCTTCATCATAACACTATATGCGTCTTTGAAACAAAAAGAGGGAGTCTTGCGGTTGTGGGAAGCCAGTAAAGCTGTTGGTGGAAGAATCAGTTGTGCCAACTACATTTGCATACTAACAAGCTTGGTGAAGCTTGGGGACATAGCACAAGCCAAGAGAATCTTCAGAGAATGGGAATCTAATTGTCAAAAATATGATATCAGAGTCTCTAATGTTCTTTTAGGTGCATATGTGCGGAATGGATTAATTGAAGAAGCTGAATCATTACATCTCCACACATTGCAGAAGGGTGGCTGTCCAAACTACAAGACATGGGAAATTCTCATTGAAGGATATGTCAATAGGCAAAAGATGGATGAGGCTGTTATTGCCATGAAAAGAGCTTTGGCTATGTTGAAAGACTGTCATTGGAGGCCGCCGCAAAGAATTGTGTTAACCATAGCTGAATATTTGGAGAAATGTGGGAATTTTGAATATGCAAATGAGTACATGACAGATATTCATAATTTAGATAACATCAAATCCATTGGGATTTGTGGATTGCTTGTTGCGAGATGTATTCTTCAATTTGTCTCCCAAAGAATAATTCGCGTGTTTTTACATGTTCAGGCTGAAGTGTTTGTAGGTGAAGCTGTAATCTTAAGGTCAACTTTTTCATTAGGTGATAATATATACGGATTGGATTCTTCGAATTCGGCTAAATCAATGGATGCAGCATTTGCACCTGCAGTTTATTCAAACATTCCTTGGGTGGCTGTTTTGGTTGATGGCTTTGGGAACTATAACTTGGAGGTTGGAGGAGTTGAAGACACTGATTTTGAAAATACATCACTCCTCAATCTGTATTTTCTCGATAGTGGAGATTACTCCAAGGTTTCGTTCATTTCAGGATTTGATTGGATCAAATCTTCTCAACAACTTTGGTTTCAAATAACTTCTGCAAACTTTCAGaaagcataCATGAATGAACCAATGCCTCAGAAAGAAGCTGCTCTCGGTCTTGCATACTTTCACATCCCATTGCCTGAATATGATAATTTTGATTCATCAAACTTCACATGTGTGAAACAAGATATCATCGGCGCTGCTTCTGTGAATTCTGGCTTTTTCACAACGTTGGTTGAAGCAGGAGATGTGAAGGTCGTTTTTGCTGGCCATGATCGCATCAACGACTTCTGTGGCAAGTTAACAAATTTAAATCTTTGTTTGGCAGGAGGGTTTCAGTATCATGCATCTGGAAAAACTGGATGGCAAGGAGAGCAAGAGTGGTGGGAGTTAGcttggagaaaatggagaatgggtttctatTTCTCACCTGATTTTCCCCTAATCTTCTCCTTAATTCTTCCCAATTTCCCTTATTTTATTCCGATTTACATTCCCGCTTCCTTCGCGCCACTCCAAACCCTCCAGAAACAAATTCTGAAAAGATTGAGTGtgactttattttttatgattatgaGGAAGAAAAGGAAAGGAAGTGAGACTGATGCATCTACGGATCTGGGTGATGTTGCTTTACCTTTGGATCATGGTTCCGTTGGTTCGTCGATTTTGAAGTCTCATTATTCGTTAGAAGATTGTTGTAGGTTGAAGAAAAGGTGTAAAGAAGATGCTACTGAGTCGTCTCATGGTTCGTTTAAAAGTCGGCTTGCTGGCATTGCCACTGCTCCGCCTTGTGGGACTTCGTCTTTGATTACATCGACTAGAGGTCTTAAGAGGAAGATAGGTTGTATTGATGTTGCTACTCAAATGGGTaggaagaagaagattgatgatgattatgttTCTGGTGAGTCGATTGGGCAAGGAAAATTTGGATCGGTTTATTTGTGTAGGTCTAGGGTTAGTGGAGCGGAATATGCATGTAAAACTTTGAGGAAGGGGGAAGAGACGGTTCATCGGGAGGTTGAGATAATGCAACATTTGTCTGGACATTCTGGGGTTGTGACATTGCAAGCAGTTTATGAAGAAGCGGAAAGCTTTCATCTTGTCATGGAATTGTGCTCTGGGGGACGATTGATTGATCAAATGGTTAAGGACGGTCCATATTCAGAACAACGGGCTGCTAACATATTGAAGGAAGTGATGTTAGTCATCAAGTACTGCCATGACATGGGAGTTGTGCATAGAGATATCAAGCCTGAGAATATTCTGCTTACAAAATCAGGAAAATTAAAGCTTGCAGATTTTGGACTCGCCATGAGAATTTCAGAAGGTCAAAACTTGACTGGATTGGCTGGAAGCCCTGCATATGTTGCCCCCGAAGTATTGTTGGGCAAATACTCTGAGAAGGTTGATATATGGAGTGCTGGAGTGCTCCTGCATGCTCTATTGGCTGGCTCTCTTCCATTTCAGGGAGATTCATTGGAAGCTGTTTTTGAGGCTATTAAGACTGTCAAATTAGATTTCCAAGCAGGGATGTGGGAATCGATATCTAAACCTGCACGAGATCTTATTGGGAGAATGCTGACAAGGGATACTTCGGCCAGGATATCAGCTGATGAAGTACTAAGGCATCCATGGATTTTGTTCTACACCGCCCAATCAATGACAATGCTGCccatcaaaacaaaattgaagaatcAAATTGGTTCCACAAGCAGACAGGTTGTCGCTATACCAGAACCTAAGTTAGGAAGAAACACGATAGATAATGGCTCACTTAGCAAGCTTTTATTGTCGGAAAGTTGCAATTCAGATGATCCAGATGAATGTGTGTTAATTGATGCACTTGCCACAGCAATTTCACATGTGAGGATATCTGAACCAAAGAGGAGCAGGTTGTGTAGTCCCACTGGTCCCATAGTTCAGCAAGGTTCATCTAACATGAAGGCTAACAACCTCTGTTGGCCTGGATCTTCTTGGAGTTCCTTTTTAGTAGAGGAGGAAAAGAGATGTGAAAGTGAAAGCGAATTGCGTGAGACACTGtaa 3807 0.4061 MANHSLIVGIRRYKIFRSSIGFVLGARNLRTHADSRSSVFSDKQNLKSLISGFKPSSRNPLPVLQNWVDQGNKLSPSELRRISRTLIKSKRYNHAFEVLNWMENQQEFRINPADHALKLELIIKNYGLMEAEEYFMSIPDSAGKKAAYLPLLCGYVKDRDTSKAETFMAKLYELGLVVNPHPYNEMMKLYLATCEYRKVRLVIQQMKRNKVPCNVLSYNLWMNACDEGERYGVAAVETVFREMQNDENVEVGWSSLVTLANVYMKAGQSEKAILVLKNAEEKLSNCNRLGYFFIITLYASLKQKEGVLRLWEASKAVGGRISCANYICILTSLVKLGDIAQAKRIFREWESNCQKYDIRVSNVLLGAYVRNGLIEEAESLHLHTLQKGGCPNYKTWEILIEGYVNRQKMDEAVIAMKRALAMLKDCHWRPPQRIVLTIAEYLEKCGNFEYANEYMTDIHNLDNIKSIGICGLLVARCILQFVSQRIIRVFLHVQAEVFVGEAVILRSTFSLGDNIYGLDSSNSAKSMDAAFAPAVYSNIPWVAVLVDGFGNYNLEVGGVEDTDFENTSLLNLYFLDSGDYSKVSFISGFDWIKSSQQLWFQITSANFQKAYMNEPMPQKEAALGLAYFHIPLPEYDNFDSSNFTCVKQDIIGAASVNSGFFTTLVEAGDVKVVFAGHDRINDFCGKLTNLNLCLAGGFQYHASGKTGWQGEQEWWELAWRKWRMGFYFSPDFPLIFSLILPNFPYFIPIYIPASFAPLQTLQKQILKRLSVTLFFMIMRKKRKGSETDASTDLGDVALPLDHGSVGSSILKSHYSLEDCCRLKKRCKEDATESSHGSFKSRLAGIATAPPCGTSSLITSTRGLKRKIGCIDVATQMGRKKKIDDDYVSGESIGQGKFGSVYLCRSRVSGAEYACKTLRKGEETVHREVEIMQHLSGHSGVVTLQAVYEEAESFHLVMELCSGGRLIDQMVKDGPYSEQRAANILKEVMLVIKYCHDMGVVHRDIKPENILLTKSGKLKLADFGLAMRISEGQNLTGLAGSPAYVAPEVLLGKYSEKVDIWSAGVLLHALLAGSLPFQGDSLEAVFEAIKTVKLDFQAGMWESISKPARDLIGRMLTRDTSARISADEVLRHPWILFYTAQSMTMLPIKTKLKNQIGSTSRQVVAIPEPKLGRNTIDNGSLSKLLLSESCNSDDPDECVLIDALATAISHVRISEPKRSRLCSPTGPIVQQGSSNMKANNLCWPGSSWSSFLVEEEKRCESESELRETL 1268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01091 1268 PANTHER OS12G0527900 PROTEIN 23 464 - -
Tsu07g01091 1268 Pfam PPR repeat 362 381 IPR002885 -
Tsu07g01091 1268 ProSitePatterns Protein kinases ATP-binding region signature. 892 915 IPR017441 GO:0005524
Tsu07g01091 1268 ProSiteProfiles Protein kinase domain profile. 886 1134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01091 1268 Pfam Pentatricopeptide repeat domain 173 225 IPR002885 -
Tsu07g01091 1268 PANTHER OS02G0796400 PROTEIN 23 464 - -
Tsu07g01091 1268 Gene3D Tetratricopeptide repeat domain 78 260 IPR011990 GO:0005515
Tsu07g01091 1268 Gene3D Tetratricopeptide repeat domain 261 464 IPR011990 GO:0005515
Tsu07g01091 1268 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 357 391 IPR002885 -
Tsu07g01091 1268 SUPERFAMILY Protein kinase-like (PK-like) 883 1157 IPR011009 -
Tsu07g01091 1268 CDD STKc_CAMK 885 1133 - -
Tsu07g01091 1268 ProSitePatterns Serine/Threonine protein kinases active-site signature. 999 1011 IPR008271 GO:0004672|GO:0006468
Tsu07g01091 1268 SUPERFAMILY HCP-like 257 473 - -
Tsu07g01091 1268 SMART serkin_6 886 1134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01091 1268 SUPERFAMILY Metallo-dependent phosphatases 509 715 IPR029052 -
Tsu07g01091 1268 Gene3D Transferase(Phosphotransferase) domain 1 877 1192 - -
Tsu07g01091 1268 Pfam Protein kinase domain 886 1134 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01091 Tsu-Chr7 9244489 9260900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01091 63 445 EF-hand Containing Proteins AT1G02150 34.896 4.21e-77 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Tsu07g01091 Pkinase 4.7e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01091 - - mtr:MTR_3g099767 820.076