Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01066 ATGGCGGAGCAACCACTTCCGATCGAGAATCCAGCAATTCCAGTTGCTGATGAAGACGATGACGGTGACGAGGACTACACTGGTGGTGATGAAACTATGGATGAATTGGAAGAGGAAACACCAAATGTTAATTCAGTGAACGTTTCAGCTGGTGCGAATCAAGCCGACGTCGTTTTGCCTCCAATTCGTACTGGTGAGCTCACTCTTTCTTTTGAAGGTCAGGTTTACGTCTTCTCCGATGTCACACCTCAGAAGGTTCAAGCTGTTTTGCTGCTTTTGGGAGGACGCGATGCACCGGCAGGCATGCCTAAAGTTGAACAACGATTTGATCAAAGTATCAAGAGCATCGGCGATATTACAAGGCATCCAAATCTTTCACAAAGAATAGCCTCCTTGGTCAGGTATCGCGAAAAACGCAAGGATAGatgttttgaaaagaaaattagaTACACCGTGAGAAAAGAAGTGGCAGAAAGGATGCATCGGGAGAAGGGGCATTTTGCATCCTTGAAGCAAAGTCCTGGTTCCTCTGGTTCGTGTGCTGGTCAAGATGGCACTCCAAATCCTGAATCTTTACGTAATTGTCAACATTGTGGAGTCAGCGAAAAGCATACTCCTGCAATGCGTCGTGGGCCAGCTGGACCAAGGACTTTATGTAATGCATGCGGCCTCATGTGGGCCAACAAGGGGACACTGAGAGATCTCAGGAAGGGGGGAAGAAATCTTTCTATTGAGCAAAGTGGTCCGGACCCTTCTATTGATGTCAAGCCTACTGTTCTTGAAGGGGAATTGTCTGTCATTGAAAATGAACAAGGTATTTCGGAAAATCCTTCCAAGGCCATTGCTGCTGAAGGTTCAAATAATCATGCATTAAATCCAAGTGATGAGGAATTGCCTGAATCTGCAGAACACCTTACAAAAACACTGCCATTGGTAATTGATCATTCTTCGGAAAATGATGAACAGGAACCCCTGGCTGAGCTTTCGAATCCTTCGGATACAGGAACATCTAATCCTTCAGATACAGATGTTGACATTCCTGGAAACTTTGATTAG 1056 0.4479 MAEQPLPIENPAIPVADEDDDGDEDYTGGDETMDELEEETPNVNSVNVSAGANQADVVLPPIRTGELTLSFEGQVYVFSDVTPQKVQAVLLLLGGRDAPAGMPKVEQRFDQSIKSIGDITRHPNLSQRIASLVRYREKRKDRCFEKKIRYTVRKEVAERMHREKGHFASLKQSPGSSGSCAGQDGTPNPESLRNCQHCGVSEKHTPAMRRGPAGPRTLCNACGLMWANKGTLRDLRKGGRNLSIEQSGPDPSIDVKPTVLEGELSVIENEQGISENPSKAIAAEGSNNHALNPSDEELPESAEHLTKTLPLVIDHSSENDEQEPLAELSNPSDTGTSNPSDTDVDIPGNFD 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01066 351 ProSiteProfiles CCT domain profile. 128 170 IPR010402 GO:0005515
Tsu07g01066 351 ProSiteProfiles Tify domain profile. 60 95 IPR010399 -
Tsu07g01066 351 MobiDBLite consensus disorder prediction 165 189 - -
Tsu07g01066 351 Pfam GATA zinc finger 195 231 IPR000679 GO:0006355|GO:0043565
Tsu07g01066 351 CDD ZnF_GATA 195 238 IPR000679 GO:0006355|GO:0043565
Tsu07g01066 351 MobiDBLite consensus disorder prediction 1 48 - -
Tsu07g01066 351 PANTHER GATA TRANSCRIPTION FACTOR 28 9 351 IPR045280 GO:0006355
Tsu07g01066 351 Pfam CCT motif 128 169 IPR010402 GO:0005515
Tsu07g01066 351 Gene3D - 189 246 IPR013088 GO:0006355|GO:0008270
Tsu07g01066 351 SMART GATA_3 189 242 IPR000679 GO:0006355|GO:0043565
Tsu07g01066 351 MobiDBLite consensus disorder prediction 323 344 - -
Tsu07g01066 351 ProSitePatterns GATA-type zinc finger domain. 195 222 IPR000679 GO:0006355|GO:0043565
Tsu07g01066 351 SMART tify_2 60 95 IPR010399 -
Tsu07g01066 351 PANTHER GATA TRANSCRIPTION FACTOR 28-LIKE ISOFORM X1 9 351 - -
Tsu07g01066 351 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 189 238 - -
Tsu07g01066 351 MobiDBLite consensus disorder prediction 14 38 - -
Tsu07g01066 351 MobiDBLite consensus disorder prediction 170 189 - -
Tsu07g01066 351 MobiDBLite consensus disorder prediction 285 351 - -
Tsu07g01066 351 Pfam tify domain 66 94 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01066 Tsu-Chr7 8936086 8941521 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01066 8 237 Tify Gene Family AT1G51600 51.020 2.11e-62 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Tsu07g01066 CCT 7.1e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01066 - - gmx:100801328 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01066 07 8936086 8941521 Tsu07g01066 07 8936086 8941521 ECH