Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01054 ATGCTAGAAAAGAATCCAAAGAAGCTTACCTTCTCCGAAATCGATGCTGCTACTCTCACACAACGGTATGATGCAACGACTGTGTTAACGGTGCTTCAGGAATTAACACATTACACGGAGTCAAAGTTTGATTGGAATGAATTGGTTAAGAAAACCACTTCTGGTATTTCTAATGCCAGAGAATATCAGATGCTATGGCGTCACTTGGCGTATCGATATGATTTGCCTGAGAATTTGGATGAAGAAGGGGTTGAACCTATGGATGATGATAGTGACATCGATTGCGAGCTGGAGTCATTTCCTTCTGCAAGTGCGGAATCTACATTAGAGCCCTCAGCATGTGTGAAGGTGATTATTGCTTCCCGTACACTAAGTGAGTCTACCCCTAGTAGCTCAACAATTGAGGCTCCATTGGCCGTAAATTTTCCAGTTTGCTGTTCATCTAGAACTCCGAAGGAAATTTCACTATCCTCTAATTTGATGGAACAGACAAGCATTATGTTTCCAGTTTTTGTTAATAGACAGACACTGCCAACTGTATCCTCAACAGATGCTTTAGAAACCAAGGGAACAGTTGGTGGCACCATGGCtaacaaaaggaaaagaaaaggatGGTCAGAGGAAGAGGACAATGAGCTACGTGCTGCTGTTCAGAGATGGGGTGAAGGGAATTGGGCAACCTTGGCAAAAGGAgaccatttttcttttaagagaACTGCAACACAATTATCTCAGAGGTGGAGCACTTTACGAAAGAAAGACGGCAGTACCAATTCAAGTGCCACCAATCCAGTGACCACCAACACCCCCGTGACCCCCGTGACCACCAACACACAATATACTGCTGAACAGTTGGCAACTCGCCACTCCTTAAATTTAGCTCTTGATATGCCATTCAAAAAGTTAACTGCTCCTGGAATGACTGATCCTGGTAGGACATCTACATCAATTAAAAATCAAGTGCAGAGTCGTAATACAACGCAAGTCTCCACAGTTCGTAGTTCTGTACCATCTCAGACTCAAGTCTCCACTGTTCGTAGTTCTGTACCACCTCAGACGCAAGTCTCCACAGTTCACAGTTCCGTACCACCTCAGACACAAGTCTCCACTGTTCGCAGTTCTGTACCACCTCAGACACCAGTCACCACAGTTCGCAGTTCTGTACCACCTCAGACACCAGTCACCACAGTTCGCAGTTCTGTACCACCTCAGACACCAGTCTCCACAGTTCGCAGTTCTGTACCACCTCAGATGCAAGTCTCCACTGTTCGTAGTTCTATACCAACTCAGACGCAAGTCTCCACTGTTTGTAGTTCTATACCAGCTCAGCGTCCATCTCAACAAGCTTGTGGTTCCCCTGCGAAACCCAAATTAGCCTCTGAAAATTCAGTCTCAAAGAGTAATGCAATTCCAGCTCGTGAGTTAAAACCTGCCATTATTCATTCTGGAGCACAAACTGTTTCACGATCAAATGCTATGCCACAATTGAAGGTTGGTCAAGCGAAAAATGTGGTACATACTGTGCCTGCTGGTAGTTCATTGACGAAGACATCCATTTCTGCTGGTTTGCCTTCTGACCAAAAGGTTCTTTCAAATGTGCCTGCTGGTAGTTCTTTGACAAAGACAACCATTTCTGCTGGTTTGCCTTCTGACCAAAAGGAACATGTTACCTCTgtaaaagaagaggaaaaaagagtTTCTGATACTGGCTCCGCACCAAAAGAGGTGAAAGAAGAGGAAGCTTCGACATCAACTACTCAGGGCAAGGTAGATAGCAATCTGGACAAGGTGAGGCTAGATTTAGATAAAGCCAAAAGCATGCCCAATGAGAAAGTTTTGGAACATAAAGCAGTGTCTCATAATCCAGGAGAGTGCGAAGAGCAAGGAAGTGTTAAGAATTCAAATTGTACCCCTAAAAAGGCCACTGAGAATGGAAATGGCAATTTGAATAAGGAAAGTCAAGTTCTAAATCAAGACAAGAAGACAGCTTCTATTACTGGAAGCTCTAACCATCAAAATGTGAATGAGAAACTCGTAAATTTGCCAAAGCAAGGTGAATGCCGTCAAGGTTTGGAAGTGCCGTGA 2085 0.4302 MLEKNPKKLTFSEIDAATLTQRYDATTVLTVLQELTHYTESKFDWNELVKKTTSGISNAREYQMLWRHLAYRYDLPENLDEEGVEPMDDDSDIDCELESFPSASAESTLEPSACVKVIIASRTLSESTPSSSTIEAPLAVNFPVCCSSRTPKEISLSSNLMEQTSIMFPVFVNRQTLPTVSSTDALETKGTVGGTMANKRKRKGWSEEEDNELRAAVQRWGEGNWATLAKGDHFSFKRTATQLSQRWSTLRKKDGSTNSSATNPVTTNTPVTPVTTNTQYTAEQLATRHSLNLALDMPFKKLTAPGMTDPGRTSTSIKNQVQSRNTTQVSTVRSSVPSQTQVSTVRSSVPPQTQVSTVHSSVPPQTQVSTVRSSVPPQTPVTTVRSSVPPQTPVTTVRSSVPPQTPVSTVRSSVPPQMQVSTVRSSIPTQTQVSTVCSSIPAQRPSQQACGSPAKPKLASENSVSKSNAIPARELKPAIIHSGAQTVSRSNAMPQLKVGQAKNVVHTVPAGSSLTKTSISAGLPSDQKVLSNVPAGSSLTKTTISAGLPSDQKEHVTSVKEEEKRVSDTGSAPKEVKEEEASTSTTQGKVDSNLDKVRLDLDKAKSMPNEKVLEHKAVSHNPGECEEQGSVKNSNCTPKKATENGNGNLNKESQVLNQDKKTASITGSSNHQNVNEKLVNLPKQGECRQGLEVP 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01054 694 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 403 549 - -
Tsu07g01054 694 MobiDBLite consensus disorder prediction 541 694 - -
Tsu07g01054 694 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 522 693 - -
Tsu07g01054 694 MobiDBLite consensus disorder prediction 554 584 - -
Tsu07g01054 694 CDD SANT_TRF 205 252 - -
Tsu07g01054 694 SUPERFAMILY Homeodomain-like 200 258 IPR009057 -
Tsu07g01054 694 ProSiteProfiles Myb-like domain profile. 197 251 IPR001005 -
Tsu07g01054 694 MobiDBLite consensus disorder prediction 593 622 - -
Tsu07g01054 694 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 4 375 - -
Tsu07g01054 694 MobiDBLite consensus disorder prediction 187 206 - -
Tsu07g01054 694 MobiDBLite consensus disorder prediction 249 274 - -
Tsu07g01054 694 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 198 255 IPR017930 -
Tsu07g01054 694 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 403 549 - -
Tsu07g01054 694 MobiDBLite consensus disorder prediction 304 415 - -
Tsu07g01054 694 MobiDBLite consensus disorder prediction 440 470 - -
Tsu07g01054 694 Pfam Myb-like DNA-binding domain 202 250 IPR001005 -
Tsu07g01054 694 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 522 693 - -
Tsu07g01054 694 MobiDBLite consensus disorder prediction 626 679 - -
Tsu07g01054 694 MobiDBLite consensus disorder prediction 308 415 - -
Tsu07g01054 694 SMART sant 201 253 IPR001005 -
Tsu07g01054 694 Gene3D - 195 258 - -
Tsu07g01054 694 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 4 375 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Tsu07g01054 Myb_DNA-binding 1.9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01054 - - mtr:MTR_3g100180 721.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01054 07 8809349 8815882 Tsu07g01054 07 8809349 8815882 ECH