Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01047 ATGAACTTGTGCTTCAAgtcttcaatttcaaaaatgGTGTATCCATGTTCAATGCAATTTTCTCCTGATGTTAGGCtcaaaactaataataatggaCCTCGTAGTTTTCAGCATCATAATCCGGCGCTTGTTAGTCGATTACATTTAGTCACCATGAATCTTTTACCGCGTACTTTGAAGCGAGATTCTTTGGCACTCCAATTTTTGAGTGGTGTACATGCTCCAATAAGGCACGCACCTTCCAGATGTGGTGTTTTTGTATGTCGGTCTGCCATGCTACCTGGTGGAGGGAATGGGACTGCCCTCGCGAAATCTGCTAGTGTTTTTTTAACAAGGTCATATGATTCTTTACTGGGAAACCCTATTTTGCTTCGATTGATTCCAGCCCTTGGTATTATTGCCTTTGCTGTTTATGGTATTGAGCCACTCATTCGTCTCAGCAGGATTCTATTTTTTCAAAGAACGGATAGTAGTTGGAAGAAAAGTAGTTCGCGATATGTTATGACATCTTATTTTCAGCCATTATTATTGTGGACTGGGGCAATGCTCATATGCAGGGCATTAGATCCAATAGTCCTGCCATCTCAGACTAGCCAGGTCGTGAAGCAACGGCTGCTTAATTTTGTGAGATCTTTGTCAACAGTGATTTCATTTGCTTACTGTTTATCAAGctTGATTCAACAAGCTCAAAAATTCTTTATGGAGGCAAATGAATCAAGTGACGCAAGAAATATGGGCCTTGATTTTGCTGGGAAGGCAATATACACTGCTGTATGGGTTGCTGCTGTGTCATTGTTCATGGAGTTGCTAGGTTTCTCCACACAAAAGTGGTTAACTGCTGGAGGTTTGGGCACAGTATTGCTCACTCTTGCTGGTCGTGAGATATTTACGAACTTCCTGTCAAGTATAATGATCCACGCAACTCGACCATTTGTATTGAATGAGTGGATTCAAACAAAGATTGAAGGATATGAGGTTTCTGGCACAGTCGAGCATGTGGGCTGGTGGTCACCAACCATTATTAGAGGTGATGATCGTGAGGCAGTTCATATTCCGAATCACAAGTTCACTGTCAATGTTGTAAGAAATTTGACTCAGAAATCTCATTGGCGCATCAAGAGTTACATTTCTATTAGTCACTTGGATGTTAACAAAATCAATAGTATTGTAGCTGATATGCGCAAGGTTTTGGCTAAAAATCCTCAAGTGGAGCAGCAGAGATTGCACAGAAGAGTCTTTTTGGAAGACATCAATCCTGAAAATCAAGCTCTAAAGATATTGATATCTTGCTTTGTGAAAACTTCACATTTTGAGGAGTACCTCTGTGTTAAGGAGGCGATCCTTTTGGATCTTCTCAGAGTTGTGAGTCATCATCGAGCCCGGTTAGCCACTCCCATCCGCACTGTTCAGAAAGTATACAGTGAGCCTGCCTCGGAAAATATTCCCTTTGGGGATAGCATTTTCACTCGATCTAGGGCAGCAGTAAATCGTCCATTCCTACTGATAGAACCACCATATAAAGTCAACGGTGAAGATAAAGTTAAGCCATCAACTCGTTCAACTCGTGCAAATGAGGAAAAAGATGCCAAGATTGTTGAAACTGCAGCATCTGATTCCAAAGGTGATGACAATTTGGCAGCAACATCAACCTCTCCACCCGGTGTAAACTCCAAAGATAAATCCAAGTCAAGTTCTGATGCCCAAATCCAGAACACGGGTTCTGATAGTTCAGTGGAGAAGACCCCCAAAACGATGCAGACTAAAAAAGAAAGTGCAGGGGATGTAGGAAAGGGTAGTACAACTCCTGCAACCGCTGCATCTAAAAATCTTCCTCAAAGTGCTGTATCTGAAACTTCGCCGGTTACTTCCCACGAGTCTGGCAGGGGAGAGACTGCTTCTGCCACTTCACAGTCAAAGCAAGATGAAGAGAAATCTTCAGTGCCGCCATCATCATTACGGCCTCCCTTAGAAGAGAATATTCTTCTTGGGGTTGCGCTTGAAGGCTCAAAACGAACTCTTCCAATTGAGGAAGAAATGAGTCCATCTCCTAACTTGGCTGAGTCACAAGAGTTTGCTGTCCAACGGAATGGGAATGGACCTGCTAACAAAGATAATGGTCCGATGTCTTCATTTCCAAATGCTAAGCAAAATGACTAG 2157 0.4196 MNLCFKSSISKMVYPCSMQFSPDVRLKTNNNGPRSFQHHNPALVSRLHLVTMNLLPRTLKRDSLALQFLSGVHAPIRHAPSRCGVFVCRSAMLPGGGNGTALAKSASVFLTRSYDSLLGNPILLRLIPALGIIAFAVYGIEPLIRLSRILFFQRTDSSWKKSSSRYVMTSYFQPLLLWTGAMLICRALDPIVLPSQTSQVVKQRLLNFVRSLSTVISFAYCLSSLIQQAQKFFMEANESSDARNMGLDFAGKAIYTAVWVAAVSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSIMIHATRPFVLNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLTQKSHWRIKSYISISHLDVNKINSIVADMRKVLAKNPQVEQQRLHRRVFLEDINPENQALKILISCFVKTSHFEEYLCVKEAILLDLLRVVSHHRARLATPIRTVQKVYSEPASENIPFGDSIFTRSRAAVNRPFLLIEPPYKVNGEDKVKPSTRSTRANEEKDAKIVETAASDSKGDDNLAATSTSPPGVNSKDKSKSSSDAQIQNTGSDSSVEKTPKTMQTKKESAGDVGKGSTTPATAASKNLPQSAVSETSPVTSHESGRGETASATSQSKQDEEKSSVPPSSLRPPLEENILLGVALEGSKRTLPIEEEMSPSPNLAESQEFAVQRNGNGPANKDNGPMSSFPNAKQND 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01047 718 MobiDBLite consensus disorder prediction 682 718 - -
Tsu07g01047 718 Gene3D - 311 366 IPR023408 -
Tsu07g01047 718 MobiDBLite consensus disorder prediction 541 581 - -
Tsu07g01047 718 Gene3D - 207 309 - -
Tsu07g01047 718 MobiDBLite consensus disorder prediction 593 647 - -
Tsu07g01047 718 Pfam Mechanosensitive ion channel 252 459 IPR006685 GO:0016020|GO:0055085
Tsu07g01047 718 MobiDBLite consensus disorder prediction 508 537 - -
Tsu07g01047 718 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC 12 704 - -
Tsu07g01047 718 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 12 704 IPR045042 -
Tsu07g01047 718 MobiDBLite consensus disorder prediction 508 718 - -
Tsu07g01047 718 SUPERFAMILY Sm-like ribonucleoproteins 295 365 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01047 Tsu-Chr7 8753347 8761794 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01047 38 693 Mechanosensitive Ion Channel Family AT1G58200 55.689 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01047 K22047 - gmx:100796022 1037.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01047 07 8753347 8761794 Tsu07g01047 07 8753347 8761794 ECH