Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01044 ATGGCATATTCGGGATCAATTCGATTGTTTCATGATATTAAGCTATACAGTAGTAATAATGGAAGATGTAGTTTTTGTCATAAACCTAATTCCAGTAATCGATTATGTTTTGTCGCCTTCAATCATCCACGGCATAGTTTGAGGATGGATTCTTCAGCACACATCTTTTCCAGATTACATTTCCAAATTAAGCCTGTACCTTCAAGATGTAATGTTTTGTTTTGCCGATCTGCTCTTGTACCGGCTGGAGGATGTGAGGCTCCGCTGATGAAAGTGGCAACTGTTTCTTTATCAAgGTCATATAATGCTATATCAGGAGGACCAATTGCGCTTCAATTGATCCCTGCCCTTGGTATCATTGGCTTTGCCATCTTTGGTCTTGAACCTCTCATGCGGCTTTGTAGGGCTCTATTTCTTCAAGAATGGAATGATAAAAGTTGGAAGAAAAGTACTTCACGTTATATAATGACATCTTATTTTCAACCTTTGCTGCTTTGGACTGGCGTAATGCTTATCTGCAGGTGCTTAGATCCACTAGTCCTACAATCAGAAACCCGTCCGCTTATAAAACAAAGGCTGTTGAGTTTTGTCAGATCTTTTTCAACCGTGTTTACATTTGCTTATTGTTCTTCAagCGTTGTTCGACAAGCACAAAAGTTCTGTAAGGAGACAAAGGACACCAGTGATGAAAGAAAAATGAGCATTGATCTTATCGGGAAAGCTGTATATACTGCAATATGGGTTGCTGCCGTGTCATTGTTCATGGAGTTGTTGGGTCTCTCTACACAGAAGTGGTTGACTGCTGGTGGTATGGGTACAGTATTGCTTTCGCTTGCAGGTCGTGAGATATTCACGAACTTCCTTTCAAGTATGATGATTCATGCAACTCGGCCATTTGTTGTGAACGAGCGGATTAAAACAAAGATCAAGGGATATGAGGTTTCTGGTAGAGTTGAGCACGTAGGTTGGTGGTCACCAACAATAGTTAGAGGTGCTGATTGCGAAGCTGTTCACATTCCTAATCACAAATTGAGTGTAAATGTTGTGAGAAATCTTAGTAAGAAAACTCATTGGCGCATCAAAACTCACCTGGCTATCAGTCACATGGATGTTAACAAGATTAATAGCATCATAGCTGATATGCGCAAGGTTTTAGCCAAAAATCCTTTAGTAGAGCAGAAAAAATTGCACAGACGGGTTTTTCTGGAGGATGTCAATCCAGAAAATCAGGCTCTTATGATATTAATATCTTGCTTTGTTAAAACTCCACATTCTGAAGAGTACCTCCGTGTTAAGGAGGACATTCTCTTGGATCTTCTTAAAGTCATCAGTCATCATGGAGCTCGGCTAGCCACACCCATCCGCACAATTCAGAAGATGTACGGTGATCCTAATTCAGAAATTGATCCATTTGACGATGCCATTTTAACTCGTTCCAACGCAAAGGGAAACCGCTCTATCCCATTCATAGATCTACCTTATAAAGTTAAGCCTTCAACGCAATCGATTATTGTAAATGGTGAAAAAGATGCCAAGATTCGTGAAACCTTGGTATCTGGTTTCAAAGACGAAGGTGAAAAAATTGCAGCGACATGGACCCCTTCTTCCAGTGCAAAGTCCCAGGATAAAGTCAAGTCATCATCTCAAGCCAAGACCCAGAATGTGGGTTCTGATAACTTAGTCCAAAAGGCCTCTAAATCGGGATCAACACCCAAAATTTTGTTATCATCTGATGAAACTTCACCGTcaaaaaaagatgaagaaaaatga 1770 0.3994 MAYSGSIRLFHDIKLYSSNNGRCSFCHKPNSSNRLCFVAFNHPRHSLRMDSSAHIFSRLHFQIKPVPSRCNVLFCRSALVPAGGCEAPLMKVATVSLSRSYNAISGGPIALQLIPALGIIGFAIFGLEPLMRLCRALFLQEWNDKSWKKSTSRYIMTSYFQPLLLWTGVMLICRCLDPLVLQSETRPLIKQRLLSFVRSFSTVFTFAYCSSSVVRQAQKFCKETKDTSDERKMSIDLIGKAVYTAIWVAAVSLFMELLGLSTQKWLTAGGMGTVLLSLAGREIFTNFLSSMMIHATRPFVVNERIKTKIKGYEVSGRVEHVGWWSPTIVRGADCEAVHIPNHKLSVNVVRNLSKKTHWRIKTHLAISHMDVNKINSIIADMRKVLAKNPLVEQKKLHRRVFLEDVNPENQALMILISCFVKTPHSEEYLRVKEDILLDLLKVISHHGARLATPIRTIQKMYGDPNSEIDPFDDAILTRSNAKGNRSIPFIDLPYKVKPSTQSIIVNGEKDAKIRETLVSGFKDEGEKIAATWTPSSSAKSQDKVKSSSQAKTQNVGSDNLVQKASKSGSTPKILLSSDETSPSKKDEEK 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01044 589 Gene3D - 298 351 IPR023408 -
Tsu07g01044 589 SUPERFAMILY Sm-like ribonucleoproteins 283 353 IPR010920 -
Tsu07g01044 589 Pfam Mechanosensitive ion channel 240 449 IPR006685 GO:0016020|GO:0055085
Tsu07g01044 589 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 589 IPR045042 -
Tsu07g01044 589 MobiDBLite consensus disorder prediction 532 589 - -
Tsu07g01044 589 MobiDBLite consensus disorder prediction 532 578 - -
Tsu07g01044 589 Gene3D - 193 297 - -
Tsu07g01044 589 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 1 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01044 Tsu-Chr7 8724809 8728684 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01044 1 557 Mechanosensitive Ion Channel Family AT1G58200 53.381 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01044 K22047 - gmx:100797302 803.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01044 07 8724809 8728684 Tsu07g01044 07 8724809 8728684 ECH