Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01039 ATGGTAACACTTAGTTGGCATCACAATGGCAATAACACTAGTATATTTATCTTTACACTCCTAGTAATAGTATTACAATCCACACATTTTGTATTTGCAACTTCTGAATCCAATATCGTGAAGTTCCTTCCTGGATTTCAAGGACCCCTTCCTTTTCTGCTTGAAACTGGGTATATTGAAGTAAGTGAAACTGAAACAGATGAGAATGCTGAACTGTTCTACTATTTTATTGAGTCTGAGAATAATCCTAAGGAAGATCCTCTCTTGCTTTGGCTTACTGGTGGTCCTGGTTGCTCTGCTTTCTCTGGCCTTGCCTTTGAAATAGGTCCAATAACATTTAAAAATGAGGTATACAATGGAAGCTTACCAAATTTGGTGTTGAGGCAACATTCATGGACAAAGGTaagtaatattatatttttggatttgccTGCTGGTACTGGATTCTCATATCCCAAAACAGAAACTGCTGTTCAGCAAAGCACCTGGAAACTAGTTCACAATGCTCATCAATTTCTTAGGAAGTGGCTGATTGATCATCCAAAATTTCTATCAAATGAAGTATACATTGGCGGTGACTCATACTCAGGCATTCCTGTCCCAATTATTGTTCAAGAAATTTCATATGGAAATGAAGGTGGCCTCAAACCATGGATAAACCTCCAAGGATACATACTGGGAAATCCCGTTACAACACCAAAAGATGATAATTACCAAATACCATTTAATCATGGCATGGCACTAATTTCTGATGAACTCTACCTGTCACTGCAAAAGAATTGTAAAGGAGAGTATACAAATATAGATCCCCAAAATGTACTTTGTCTGAGAGTCTTCCAATCCTACAAGGAGACTATTTCAGGAGTGTTCACGCTTCATATTTTGGAACCGAAATGTGAAACTGAttttcagaatcaaatggaagTTCCCAGTAGGAGActtattgatatttttagttcTTCTCTCACAATGCCACCTTTATATTGTCGGACTGATGCATATTTCCTCAGTCTCTATTGGGCTAACGATGATAATGTTCGCAAAACATTGCACATTCGAAAGGGAAGTATAGGAAAATGGAAGCGATGTAACTTCGGCATACCATTTAAGCATGAAGTTTTTAACAGTTTCCCATATCATGCAAATGTTAGCAGAAAAGGCTTCCGTTCATTAATATACAGTGGGGATCATGACATGAAAGTTCCATTCTTGGGGACTCAAGCGTGGATAAGATCTTTAAACTATTCCATTGTTGATGATTGGAGGCAATGGTATTCTAATGCGCAAGTAGCAGGatACACGAGGACTTACTCAAACCGGATGACATTTGCAACTGTGAAGgGGGGAGGACACACTGCTCCAGAGTACAAACCTAAAGAATGCTTAGCCATGTTGAGCAGGTGGTTATCTAATAACCCACTCTAG 1425 0.3733 MVTLSWHHNGNNTSIFIFTLLVIVLQSTHFVFATSESNIVKFLPGFQGPLPFLLETGYIEVSETETDENAELFYYFIESENNPKEDPLLLWLTGGPGCSAFSGLAFEIGPITFKNEVYNGSLPNLVLRQHSWTKVSNIIFLDLPAGTGFSYPKTETAVQQSTWKLVHNAHQFLRKWLIDHPKFLSNEVYIGGDSYSGIPVPIIVQEISYGNEGGLKPWINLQGYILGNPVTTPKDDNYQIPFNHGMALISDELYLSLQKNCKGEYTNIDPQNVLCLRVFQSYKETISGVFTLHILEPKCETDFQNQMEVPSRRLIDIFSSSLTMPPLYCRTDAYFLSLYWANDDNVRKTLHIRKGSIGKWKRCNFGIPFKHEVFNSFPYHANVSRKGFRSLIYSGDHDMKVPFLGTQAWIRSLNYSIVDDWRQWYSNAQVAGYTRTYSNRMTFATVKGGGHTAPEYKPKECLAMLSRWLSNNPL 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01039 474 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 18 472 - -
Tsu07g01039 474 SUPERFAMILY alpha/beta-Hydrolases 40 473 IPR029058 -
Tsu07g01039 474 Pfam Serine carboxypeptidase 44 471 IPR001563 GO:0004185|GO:0006508
Tsu07g01039 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 176 201 IPR001563 GO:0004185|GO:0006508
Tsu07g01039 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 140 IPR001563 GO:0004185|GO:0006508
Tsu07g01039 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 441 454 IPR001563 GO:0004185|GO:0006508
Tsu07g01039 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 141 151 IPR001563 GO:0004185|GO:0006508
Tsu07g01039 474 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 18 472 IPR001563 GO:0004185|GO:0006508
Tsu07g01039 474 Gene3D alpha/beta hydrolase 50 474 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01039 Tsu-Chr7 8681083 8690877 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01039 38 63 Calmodulin-binding Proteins AT2G22960 73.077 3.54e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01039 K16296 - gmx:100792006 641.343