Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01038 ATGGCAACAGTTAGTTGGTATTACAATGGCAATAACACTAGTATATTTATCTTTACACTCCTAGTAATAGTATTACAATCCACACATTTTGTATTTGCAACTTCTGAATCCAATATTGTGAAGTTCCTTCCTGGTTTTCAAGGGCCACTTCCTTTTCTACTAGAAACTGGATACATTGAAGTAAGTGAAACTGAAACAGATGAAAATGCAGAAgtgttttactattttattgaaTCTGAGAACAATCCTAAGGAAGATCCTCTCTTGCTTTGGCTTACTGGTGGTCCTGGTTGCTCTGCCTTATCTGGCCTTGTCTTTGAAATAGGTCCACTAACATTTATAAATGATGAATACAATGGGAGCTTACCAAATTTGGCCTTGAGGTCACATTCTTGGACAAAGGTtagtaatattatatttttggatttgccTGTTGGTACTGGATTCTCATATCCCAAAACAGAATCTGCTGTTCAGCAAAGCACCTGGAAACTAGTTCACAATGCTCATCAATTTCTTAGGAagTGGCTGATTGATCATCCAAAATTTCTATCAAATGAAGTATACATTGCTGGTGACTCGTACTCGGGCATTCCTGTGCCAATTATTGTTCAAGAAATTTCATATGGAAATGATGATGGCCTCCAACCCTGGATAAACCTCCAGGGATACATACTGGGAAATCCCTTAACAACACCAAAAAACGATGATTATCGAATACCATTTAGTCATGGCATGGCACTCATTTCTGATGAACTCTATCAGTCACTGGAAAAGAATTGTGGGGGCAACTATAAACATATAGATCCCCAAAACgtattttgtttgaaagattATCAATCCTACACGGAGACTATTTCAAGTGTGTGTATGGCTCATATTTTGGAACCGATATGTGAGTCTGATTTTATTGATGCAATTGAGGTTCCTCGGAGGACAGTTCTTATTAATAAAGCTGATCACACCCTTTTTAGTTCTTCTCTCACTATGCCACCTTTAAATTGTCAGACTCATGTATATTTCCTCAGTCCCTATTGGGCTAACGATGATAATGTTCGCAAAGCACTGCACATTCGAAAGGGAAGTATTGGAAAATGGAAGCGATGTAACCAGGACATACCTTATAAGGATGAAACACTTAACAGTTTCCCATATCATGCAAATCTTAGCAGAAAAGGCTTTCGCTCATTAATATACAGcGGGGATCATGACATGAAAGTTCCATTTTTGGCAACTCAAGCGTGGATAAGATCTTTAAATTACTCTATCGTTGATGATTGGAGGCAATGGTATTATAATGACCAAGTAGCAGGATACATGAGAACTTACTCAAATCGGATGACATTTGCCACCGTGAAGGGGGGAGGACATACAGCTCCTGAATACAAACCTGAAGAATGCTTAGTCATGTTTAGTAGGTGGATATCTAATAAGCCACTTTAG 1443 0.3701 MATVSWYYNGNNTSIFIFTLLVIVLQSTHFVFATSESNIVKFLPGFQGPLPFLLETGYIEVSETETDENAEVFYYFIESENNPKEDPLLLWLTGGPGCSALSGLVFEIGPLTFINDEYNGSLPNLALRSHSWTKVSNIIFLDLPVGTGFSYPKTESAVQQSTWKLVHNAHQFLRKWLIDHPKFLSNEVYIAGDSYSGIPVPIIVQEISYGNDDGLQPWINLQGYILGNPLTTPKNDDYRIPFSHGMALISDELYQSLEKNCGGNYKHIDPQNVFCLKDYQSYTETISSVCMAHILEPICESDFIDAIEVPRRTVLINKADHTLFSSSLTMPPLNCQTHVYFLSPYWANDDNVRKALHIRKGSIGKWKRCNQDIPYKDETLNSFPYHANLSRKGFRSLIYSGDHDMKVPFLATQAWIRSLNYSIVDDWRQWYYNDQVAGYMRTYSNRMTFATVKGGGHTAPEYKPEECLVMFSRWISNKPL 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01038 480 SUPERFAMILY alpha/beta-Hydrolases 40 479 IPR029058 -
Tsu07g01038 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 176 201 IPR001563 GO:0004185|GO:0006508
Tsu07g01038 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 447 460 IPR001563 GO:0004185|GO:0006508
Tsu07g01038 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 141 151 IPR001563 GO:0004185|GO:0006508
Tsu07g01038 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 140 IPR001563 GO:0004185|GO:0006508
Tsu07g01038 480 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 18 479 - -
Tsu07g01038 480 Pfam Serine carboxypeptidase 44 477 IPR001563 GO:0004185|GO:0006508
Tsu07g01038 480 Gene3D alpha/beta hydrolase 50 480 IPR029058 -
Tsu07g01038 480 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 18 479 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01038 Tsu-Chr7 8676072 8679919 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01038 37 63 Calmodulin-binding Proteins AT2G22960 70.370 2.77e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01038 K16296 - gmx:100792006 642.884