Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01036 aTGAAAGGAGAATACGtagaacatcaaaatcaaaacaaaggaACCGAAACACCACCACCTTCATTACTCTTCTCAAAGCTTCACCAATCAAACTCTCAAAACAATCCATTTCACCCTTTTCAACTCTCTCATGAATGTCAAACAGTCAGAGAAGATAGCTCCGGCGGCGGCGGTGGTAGCGGTGCACAGAAACCTAACTCATCCGGCGATGGTGCGTCAATCGAGGTTGTTAGACGACCTAGAGGACGTCCGCCTGGATCTAAAAACAGACCAAAACCACCTGTTATTATAACACGTGATTCTGAACCTGCTATGAGTCCTTTTATTCTAGAAGTTTCTAGTGGAAACGACGTCGTTGAAGCTATTTCACAGTTTAGTCGTCGTAAGAATATTGGTTTATGTGTTTTAACTGGTTCAGGAGCTGTTGCTAACGTTACTCTCCGTCAACCGTCAACTACACCTGGAACAACCGTTACTTTTCACGGTCGTTTTGATATTCTCTCTGTAACTGCTACTTTTCTACAATCCggtagtggtggtggtggttcgCCGGCGGTTCCGAATGGATTCTCGATCTCGCTTGCTGGACCACAAGGACAGATCGTTGGTGGAATTGTTGCTGGAAATTTGATTGCTGCGGGAACGGTTTTTATTATAGCTGCTTCGTTTAATAATCCGTCGTATTATCGGTTGCCGTTGGATGAAGAAGGTGGACATTCGGTTTCTGGTGGTGATGGTAATTCTCCGGCTGTTTCCGGTGCGGTGGATAGCGGTCAAGGTCAAGGTGGTGATCAGTCGTGTGGGATGTCTATGTACAGCTGTCATATGCCATCATCTGATGTGATTTGGGCTCCATCTGCAAGACCTCCACCTTATTGA 879 0.4334 MKGEYVEHQNQNKGTETPPPSLLFSKLHQSNSQNNPFHPFQLSHECQTVREDSSGGGGGSGAQKPNSSGDGASIEVVRRPRGRPPGSKNRPKPPVIITRDSEPAMSPFILEVSSGNDVVEAISQFSRRKNIGLCVLTGSGAVANVTLRQPSTTPGTTVTFHGRFDILSVTATFLQSGSGGGGSPAVPNGFSISLAGPQGQIVGGIVAGNLIAAGTVFIIAASFNNPSYYRLPLDEEGGHSVSGGDGNSPAVSGAVDSGQGQGGDQSCGMSMYSCHMPSSDVIWAPSARPPPY 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01036 292 MobiDBLite consensus disorder prediction 1 99 - -
Tsu07g01036 292 PIRSF ESCAROLA 10 287 IPR014476 GO:0003680
Tsu07g01036 292 MobiDBLite consensus disorder prediction 252 266 - -
Tsu07g01036 292 MobiDBLite consensus disorder prediction 10 70 - -
Tsu07g01036 292 CDD DUF296 107 223 IPR005175 -
Tsu07g01036 292 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 23 291 IPR014476 GO:0003680
Tsu07g01036 292 SUPERFAMILY AF0104/ALDC/Ptd012-like 104 237 - -
Tsu07g01036 292 Gene3D - 106 242 - -
Tsu07g01036 292 Pfam Plants and Prokaryotes Conserved (PCC) domain 107 225 IPR005175 -
Tsu07g01036 292 ProSiteProfiles PPC domain profile profile. 102 245 IPR005175 -
Tsu07g01036 292 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 23 291 - -
Tsu07g01036 292 MobiDBLite consensus disorder prediction 238 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01036 Tsu-Chr7 8652170 8653775 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01036 1 292 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 57.383 6.45e-103 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01036 - - gmx:100788098 358.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01036 07 8652170 8653775 Tsu07g01036 07 8652170 8653775 ECH