Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01026 ATGGGTTATCTTTTTTGCAATGCAGAATCTGCAATTGCTACTTGTGATCCTCACTATTGGGAtctcaaaaaaagaaacaaatcaatTACAAACCGTACACATACTATCAAAGAGTTTAACTACACCGACCTTGTCGCTGCAACTAACTGTTTCTCTGCCGAAAGCTACCTAGGTAAAGGTAGCCACGGCAGAGTTTACCGAGGTACATTAAACGGCTACGATCTGATGGTCGCCGTTAAAACAACAAAGTTAACTACAAAAGCAAAAGCATCAAATAATCACAACAACAACTGCACCGGTTGTGGTAACTGTACAAGTCCAGCTGAAAACGAGATCGAGATTCTCTCACAAATTCCAAATCATCGTCTCGTGAATCTCATCGGTTACTGCACCGATCTTAAtggcaataaattaattgtcgTTGAATATATGCCAAACGGTTCACTTCACGATCTATTACATTCTACAAATAAACCGCCCGGTTGGAACAAACGATTCCGGTTCGCATTACAAGTTGCAAAAGCGGTTCGAACTTTGCACGGTTCAAATCCACCGGTGATTCATCGTGATATTAAATCTTCCAATGTTTTAATCGATCGAGATTGGAAAGCGAGACTCGGTGATTTCGGTTTAGCTCTTAGAGGACACGTGGAAGACGTTCGTGTTAAGTGTACGCCACCGGCGGGGACGTTAGGATATCTCGATCCATGCTATCTTGCGCCGGAAGATCTTAGTGCGAAAAGTGATGTGTTTAGTTTCGGGATCTTGTTGTTGGAGATAATCAGTGGAAGGAATGCTATTGATGTTAATTATAGTCCTCCGTCGGTTGTTGATTGGGCGGTGCCGTTGATTAGGCGAGGTGATTTCGTCGGGATCTGTGATCGGAGAATTGGAACGCCGTCGGATATGGCGGTTATGAGGCAAATTGCGGTGATTGCAGCGAGATGTGTTAGATCGACGGCGGAGAAGAGACCGGCGATGGTTGAGGTTGTGGAGTGTCTTAAATTGGCGAGAAAGAGGATTCATTCGTCGCCGATTTGGAGTAGTTTCAGACGGCGCGTGACGCGTGTGGAAAGTGCGCAACCGTTGATGAGTTGGGAAGAAGCTTATGATcatgattatgattataatCATGATTATCATCATCACAGTAATTATGATAATTATGATTGGTATGATAATAAGAGTGAGGAACTTGTGAAGATTGTAAAGAGCGGAAACAGTAGAAGAAAGAGTAAAGTATCAAGTGTAGCTAGTGTAGAGTATGAGACCAAACCTTCCAAGAAAGAAGTGAGATCTAAACCGTCCAAGAAAATAACGAGATCTAAGACCGTTGGTTCTTCTTCTATTTGTGTTGGTAGCTGTAGTAGAAAGAGTGGGATTCAAATGGTTTCAGAGAAAACGGGTGTAATGAAGCTAAAAAAGTCAAAGTCAACGGGAGTCTTGCAAGGTCCTCTGCTTTTGCATCAAAAGAAGAATGATGTAATTCATTCGGCTGCCGAGTCTGAGACGATAGCATTAGCAATGTCGAAGTTGGTTATTCGAGATAATAAGAAGTTGGAAAAGAAAATGCTCGAAAAACCATTAGTTAAGTCGTATGGTTGGGAGTCAGAATGA 1617 0.4125 MGYLFCNAESAIATCDPHYWDLKKRNKSITNRTHTIKEFNYTDLVAATNCFSAESYLGKGSHGRVYRGTLNGYDLMVAVKTTKLTTKAKASNNHNNNCTGCGNCTSPAENEIEILSQIPNHRLVNLIGYCTDLNGNKLIVVEYMPNGSLHDLLHSTNKPPGWNKRFRFALQVAKAVRTLHGSNPPVIHRDIKSSNVLIDRDWKARLGDFGLALRGHVEDVRVKCTPPAGTLGYLDPCYLAPEDLSAKSDVFSFGILLLEIISGRNAIDVNYSPPSVVDWAVPLIRRGDFVGICDRRIGTPSDMAVMRQIAVIAARCVRSTAEKRPAMVEVVECLKLARKRIHSSPIWSSFRRRVTRVESAQPLMSWEEAYDHDYDYNHDYHHHSNYDNYDWYDNKSEELVKIVKSGNSRRKSKVSSVASVEYETKPSKKEVRSKPSKKITRSKTVGSSSICVGSCSRKSGIQMVSEKTGVMKLKKSKSTGVLQGPLLLHQKKNDVIHSAAESETIALAMSKLVIRDNKKLEKKMLEKPLVKSYGWESE 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01026 538 Pfam Protein tyrosine and serine/threonine kinase 54 334 IPR001245 GO:0004672|GO:0006468
Tsu07g01026 538 Gene3D Transferase(Phosphotransferase) domain 1 144 348 - -
Tsu07g01026 538 PANTHER - 1 522 - -
Tsu07g01026 538 PANTHER OS01G0750732 PROTEIN 1 522 - -
Tsu07g01026 538 ProSiteProfiles Protein kinase domain profile. 51 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01026 538 Gene3D Phosphorylase Kinase; domain 1 35 143 - -
Tsu07g01026 538 ProSitePatterns Protein kinases ATP-binding region signature. 57 80 IPR017441 GO:0005524
Tsu07g01026 538 SMART serkin_6 51 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01026 538 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Tsu07g01026 538 SUPERFAMILY Protein kinase-like (PK-like) 26 344 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01026 Tsu-Chr7 8553521 8555401 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01026 17 345 Receptor kinase-like Gene Family AT3G59420 39.820 1.15e-67 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Tsu07g01026 PK_Tyr_Ser-Thr 3.7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01026 - - cam:101503747 772.696