Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01023 atggcACCAAGTTTTGACTGTGTTAATAGTCTTCTTTGTACTGAGGAAGATAGCAGTGTTtttgatgatggtgttgattCGATGGAGGAGGTTTATGAGGATTCGTGGCGTCCTAGGTTCGATGACAATCGGAGGAACCAACAACAACGATTTGGTGTTGTTCCTGATGAGTTGCCATTGCAAAGTGAAGATTGTTTGGTTCTGATGTTGGAAAAAGAGTCTCAACAATGGCCTGGTGTTGATTACTTGAATAGATTGCAATCTGGGGTTTTAGATGTTGGGGCAAGAAATGAAGTCATCGATTGGATTCAGAAGGTTCAAGCACATTTCGGTTTCGGTCCACTATGTGCTTATCTGTCCATTAATTATATGGATCGTTTCCTTGCTGCGTATGAATTACCGAAGGGAAGGGCTTGGACAATGCAATTGTTGGCTGTAGCGTGCATATCTTTGGCAGCGAAAGTAGAGGAGACTTGTGTTCCTATGACTCTTGATTTGCAAATTGGTGAGTCGAAGTTTGTATTCGAAGCGAAAACCATTCAGCGAATGGAACTTCTAGTGCTTAGTACATTGAAGTGGAGAATGCAATCAATTACTCCTTTTTCCTTCATTGAATATTTCCTTTCGAAGATTACCGATAATGACGATAAGAGTTCATTAACGTCTTCAATTTCGCAATCTACTCAACTTATATCAAATACCATTAAAGGTATTGACTTCTTGGGATTCAAACCATCTGAAATTGCAGCAGCAGTGGCTACATGTGTTGTTGGTGAAACCCAAGCAATTGATACCAACAAATCAATTTCTACTCTGATTCAATACATAGAAAAGGAGAGATTATTGAAGTGTATTGAAAAAGTCCAAGAGATGTTGTCATTGAGCAATGTTGTGACTGTTAAGGATTCAAGTGCATCATCTGTCCCTAATGTGCCACAAAGTCCAATAGGTGTGTTGGATACATTATGCTTCAGCCAGAAAAGTGATGACACCAATGTtggtgttggtggtggtggtggttcatGTTCTTCTTCACATATGAGTAGCCCCCCAGATGCTAAGAGAAGAAAGCTAAACAAAACTTGTGGGGCATAA 1095 0.3799 MAPSFDCVNSLLCTEEDSSVFDDGVDSMEEVYEDSWRPRFDDNRRNQQQRFGVVPDELPLQSEDCLVLMLEKESQQWPGVDYLNRLQSGVLDVGARNEVIDWIQKVQAHFGFGPLCAYLSINYMDRFLAAYELPKGRAWTMQLLAVACISLAAKVEETCVPMTLDLQIGESKFVFEAKTIQRMELLVLSTLKWRMQSITPFSFIEYFLSKITDNDDKSSLTSSISQSTQLISNTIKGIDFLGFKPSEIAAAVATCVVGETQAIDTNKSISTLIQYIEKERLLKCIEKVQEMLSLSNVVTVKDSSASSVPNVPQSPIGVLDTLCFSQKSDDTNVGVGGGGGSCSSSHMSSPPDAKRRKLNKTCGA 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01023 364 ProSitePatterns Cyclins signature. 96 127 IPR006671 -
Tsu07g01023 364 SUPERFAMILY Cyclin-like 180 307 IPR036915 -
Tsu07g01023 364 MobiDBLite consensus disorder prediction 350 364 - -
Tsu07g01023 364 CDD CYCLIN 96 188 IPR013763 -
Tsu07g01023 364 Pfam Cyclin, C-terminal domain 198 295 IPR004367 -
Tsu07g01023 364 Gene3D - 69 287 - -
Tsu07g01023 364 PANTHER CYCLINS 1 357 IPR039361 -
Tsu07g01023 364 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 357 - -
Tsu07g01023 364 SUPERFAMILY Cyclin-like 60 195 IPR036915 -
Tsu07g01023 364 MobiDBLite consensus disorder prediction 335 349 - -
Tsu07g01023 364 MobiDBLite consensus disorder prediction 335 364 - -
Tsu07g01023 364 SMART cyclin_7 101 189 IPR013763 -
Tsu07g01023 364 SMART Cyclin_C_2 198 325 IPR004367 -
Tsu07g01023 364 Pfam Cyclin, N-terminal domain 68 195 IPR006671 -
Tsu07g01023 364 Gene3D - 79 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01023 Tsu-Chr7 8527980 8530804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01023 63 333 Core Cell Cycle Gene Families AT2G22490 48.188 4.45e-82 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01023 K18810 - gmx:547739 430.639