Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00989 aTGACTTCTACTGCTACTAacaaatcttcatcttcttgttcttctttgaATCAAGGTGGTAAAGGACAATCGATTCAGCAACGTAGATTAACTAGACAGAGGAGATTATTTTATCCTAGTGATAATAATCAAGAGAGTGAATATTTTCATTCTAACGAaggtgtttctttttctttaccTTCTTCTCCTTTAAGAACTAGTTCTGATCATTGGTCTTCTTCTGCTGTTCCTCAACCACTTCCTCTTCCCGAGTCACCGTTGACTCGACATCATCATGCTGCTTTACCCTTTTCCAGAAAGACAGTGGATCATGATGCTGTGAGAAGTTTAAGGTCTTCTAGCAATTTGAGTAGACCCACTTTTGACACGGTGAATGGAAACACGAATTCTGATTTGAGAGTGAATATTCCGCCTGCTAGAGGTTTGGTGTCAAGCCATAGTTCTTGTAAAGATACTGGAAAACACTCTCATGATAATGATTGTGAAGGTATTTCCAACAATAAATTGCAATTTGCTGCCAAGAGTGCCCCAACAAGCATATTCAACAGTCCCGTTACTAGTCCACGCAGATTAAGCAGTGTAGATTTATTTGATCCTTCTATCAATTTTCCTCAAGATTTTAATGACATTTTGAGATTGCCTGCTAAAACTTCCCGTAGTCCAGACTTATCTCCTCGTCGTAGTTTGGGGAACCACAGTCCTATTCACCGCCACACTATTCAAGGGGGAGCTCCTTCTCACCACTTTAAACATTGCTCCAGAGTGTCTCCTGAAAATAACCATGTCGATGCACATCCATTGCCCCTTCCACCAAGAGcttcaccaccaccacaacaatCACCTCCACAACATCAATCAAATGTCACGTTGCATCACTCAACAGAAATTTTTCATTCAATGAAGGGTCAATGGCAGAAAGGAAAACTTATTGGACGAGGATCATTTGGAAGTGTTTATCAGGCGACAAACCTAGAGACTGGAGCCTCATGTGCAATGAAAGAGGTGGATCTGTTTCCTGATGATCCTAAATCTGCTGACTGCATGAAGCAGCTAGACCAGGAAATCAGAATTCTTGGTCAACTACACCACCCCAACATTGTTCAATATTATGGCAGTGAAATAGTTGGTGATCAATTGTGCATATATATGGAATATGTCCATCCTGGATCATTAACTAAGTTTATGCATGAACATTGTGGGGCTATGACAGAATCTGTGGTTCGCAATTTTACACGGCATATTCTCTCTGGATTGGCGTACTTACATAGTACCAAAACTATCCACAGGGACATTAAAGGTGCAAACTTGCTGGTTGATGCATCAGGCATTGTCAAGCTTGCAGATTTTGGGGTGTCAAAAATTCTGACAGAGAAATCATATGAACTTTCGCTGAAAGGAAGTCCGTACTGGATGGCTCCAGAGCTCATGATGGCTGCCATGAAGAATGAAACCAATCCCAATGTCGCCATGGCTGTCGATATATGGAGCTTAGGATGCACCATCATCGAAATGTTGACAGGAAAACCCCCTTGGAGCGAGTTTTCAGGACATCAAGCCATGTTCAAGGTACTGCACAGATCCCCGGACATACCCAAAACTTTATCCCCAGAAGGACAGGATTTCCTTGAGCAGTGTTTCCGAAGGAATCCTGCAGAACGACCATCTGCAGCTATGCTTCTGACACATGCCTTTGTGCAAAATTTGCATGATCAAGATATTATAGTTCATTCACCACAAGTCTGTCATAAAGAAGACACCATAGTTCATTCACAAGTCTGTCATAAAGAAGAAACTGGACCCAAAGATGAACCGCGTAAACACAGCCCAGGACACAGTTCAAAACATAGCCGTGGTGTAGTGCCAGCTTCTTTTCGTGCACGAATTTTttgcaaaattcaaaatttaatcgGTGACACTTCCAAAAAAGCTGATACCGAGGAATCTAATCACATTAGATCTTCTCCTGTATCTCCTGTCTCGCTGACTGAAGTTAACAGTCCTCAATCTCCATTTAATCCTAATAACCGCAATTGCATGACCGTTTCCAAACCCTCAAACATACCCTTCACGATTATGAGAATCGTGAAGCAACTATGA 2097 0.402 MTSTATNKSSSSCSSLNQGGKGQSIQQRRLTRQRRLFYPSDNNQESEYFHSNEGVSFSLPSSPLRTSSDHWSSSAVPQPLPLPESPLTRHHHAALPFSRKTVDHDAVRSLRSSSNLSRPTFDTVNGNTNSDLRVNIPPARGLVSSHSSCKDTGKHSHDNDCEGISNNKLQFAAKSAPTSIFNSPVTSPRRLSSVDLFDPSINFPQDFNDILRLPAKTSRSPDLSPRRSLGNHSPIHRHTIQGGAPSHHFKHCSRVSPENNHVDAHPLPLPPRASPPPQQSPPQHQSNVTLHHSTEIFHSMKGQWQKGKLIGRGSFGSVYQATNLETGASCAMKEVDLFPDDPKSADCMKQLDQEIRILGQLHHPNIVQYYGSEIVGDQLCIYMEYVHPGSLTKFMHEHCGAMTESVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDASGIVKLADFGVSKILTEKSYELSLKGSPYWMAPELMMAAMKNETNPNVAMAVDIWSLGCTIIEMLTGKPPWSEFSGHQAMFKVLHRSPDIPKTLSPEGQDFLEQCFRRNPAERPSAAMLLTHAFVQNLHDQDIIVHSPQVCHKEDTIVHSQVCHKEETGPKDEPRKHSPGHSSKHSRGVVPASFRARIFCKIQNLIGDTSKKADTEESNHIRSSPVSPVSLTEVNSPQSPFNPNNRNCMTVSKPSNIPFTIMRIVKQL 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00989 698 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 8 692 - -
Tsu07g00989 698 MobiDBLite consensus disorder prediction 591 609 - -
Tsu07g00989 698 MobiDBLite consensus disorder prediction 640 675 - -
Tsu07g00989 698 MobiDBLite consensus disorder prediction 1 75 - -
Tsu07g00989 698 ProSitePatterns Protein kinases ATP-binding region signature. 310 333 IPR017441 GO:0005524
Tsu07g00989 698 SUPERFAMILY Protein kinase-like (PK-like) 278 592 IPR011009 -
Tsu07g00989 698 MobiDBLite consensus disorder prediction 108 134 - -
Tsu07g00989 698 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 8 692 - -
Tsu07g00989 698 SMART serkin_6 304 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00989 698 MobiDBLite consensus disorder prediction 591 618 - -
Tsu07g00989 698 Pfam Protein kinase domain 305 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00989 698 Gene3D Transferase(Phosphotransferase) domain 1 301 605 - -
Tsu07g00989 698 MobiDBLite consensus disorder prediction 212 287 - -
Tsu07g00989 698 MobiDBLite consensus disorder prediction 650 675 - -
Tsu07g00989 698 ProSiteProfiles Protein kinase domain profile. 304 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00989 698 MobiDBLite consensus disorder prediction 1 134 - -
Tsu07g00989 698 MobiDBLite consensus disorder prediction 268 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00989 Tsu-Chr7 8133149 8139618 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00989 29 567 MAP Kinase Kinase Kinase AT5G66850 47.504 1.34e-148 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Tsu07g00989 Pkinase 1.6e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00989 - - gmx:100781764 836.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00989 07 8133149 8139618 Tsu07g00989 07 8133149 8139618 ECH