Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00988 atgacTCCTACTAACCAAGGTAGTAAGGGACAATTTATTCAGCAGTCCGGGATTACCGGACAGAACCAAGATGGTCAATtctttcattcaaattcataccATGCTGTTTCTCCTCAACCGCCTTCTCCTCTTCGATCTAGGTCCTGTCATTGGTCTCCTGCTGTTTCTCCTCAACCATTTCCGGAATGGCCGTTGTACACACGACCTGATCATCATGCTGCCTTACGCTTTTCAGGAAAGACAGTGGATCATGCTGCTGTGAAAAGTTTAAGGCCTTCCAGCAGTTTGAGAAGACCTGCTCATGATAGTGACTTTGAAGGTATTTCCAACACAAAATGGCAATTTTCTACCAAGAGTGCCCCAACAAGCATATTATCCAGTCCTGTTACTAGTCCACACAGATTAAGCAGTGTAGATTTATTTGATCCTTCCAACAATTTTTGTCAAGATTTTAATGACATTATGAGAATGCCTGCTAAAACTGCGCTTACTCCAGACTTGTCTCCTCGTCGTAGCTTGGGGAACCACAGTCCTAACTACCACCACACTATTCAAGATTTTCCTCAAGATTTTAATGACATGTTGAGATTGCCTGCTAAAACTACTCGTAGTCCAGACTTGTCTCCTCGTTTGGGGAACCACAATCCTAACTACCGCCACACTATTCAAGATTTTAAGGATGTGTCGAGATTGCCTGCTAAAACTACTCGTAGTCCAGACTTGTCTCCTCGTCGTAGCTTGGGGAACCGCAGTCCTAACTACCGCCACACTATTCAAGATTTTAATGACATGTCGAGATTGCCTGCTAAAACTACTCGTAGTCCAGACTTGTCTCCTCGTCGTAGCTTGGGAAACCACAGTCCTAACCACCACCACACTAGTCAAGGGGGATCTCATTCTCACCGCTTTCAATATTGCATCAGAGTGGggaatgaaaataactatgtcgATGGATATCCATTGCCCCTTCCTCCGAGAGcttcaccaccaccacaacaatCACCTGCACAACATCAAACAAATGTCACATTGCATCACTCAACCGGAAACTTTCATTCAATGAAGGGTCAATGGCAGAAAGGAAAACTTATTGGACGAGGATCGTTAACAAGTGTTTATATGGCAACAAACATTGAGACTGGAACCTCATGCGCAATGAAAGAAGTGGATCTATTTCCTGATGATCCTAAATTTGCTGACTGCATAAAGCAGCGACACCAGGAAATCAGAATTCATGGTCAACTACACCATCCCAACATTGTTCAATATTATGGCAGTGAAGTAGTTGGTGATCAATTGCGCATATATATGGAATATGTCCAACTTGGATCACTGAATAAATTTATGCATGAACATTCTGGGGCTATGACAGAATCTGTGGTTCGCAATTTTACGAGGCATATTCTCTCTGGATTGGCTTACTTGCATAGTACCAAGACTATCCACAGGGAAATTAAATGTGCAAACTTGCTGGTTGATGCATCTGGCATTGTTAAGCTTGCAGGTTTTAGGATGTCAAAAATTCTGACTAAGAAATCAAGTGAACTTTTGCTGAACAGAAGTCCCTACTGGATGGCTCCAGAGCTCATGATGGTTTCCATGAAGAAAGCAACCAATCCCAATGTTGCCATGGCTGTCGATATATGGAGCTTAGGATGCACCGTCATCGAAATGTTGACAGGAAAACCCCCTTGGAGCGAGTTTTCAGGGCATCAAGCCATGTTCAAGACACTGCACAGATCCCCAGACATACCCAAAATTTTATCTCCAGAAGGACATGATTTCCTTGAGCAGTGTTTCCGAAGGAATCCTGTAGAACGACCATCTGCAGCGGAGCTTCTAACACATGCATTTGTACAAAAGAAGACATTGGACCCAAAGATTAATCACGTAAACATAGTCCAGGAGGCGGCTCAAAAAATAGCCGCGGTGTAG 1935 0.4212 MTPTNQGSKGQFIQQSGITGQNQDGQFFHSNSYHAVSPQPPSPLRSRSCHWSPAVSPQPFPEWPLYTRPDHHAALRFSGKTVDHAAVKSLRPSSSLRRPAHDSDFEGISNTKWQFSTKSAPTSILSSPVTSPHRLSSVDLFDPSNNFCQDFNDIMRMPAKTALTPDLSPRRSLGNHSPNYHHTIQDFPQDFNDMLRLPAKTTRSPDLSPRLGNHNPNYRHTIQDFKDVSRLPAKTTRSPDLSPRRSLGNRSPNYRHTIQDFNDMSRLPAKTTRSPDLSPRRSLGNHSPNHHHTSQGGSHSHRFQYCIRVGNENNYVDGYPLPLPPRASPPPQQSPAQHQTNVTLHHSTGNFHSMKGQWQKGKLIGRGSLTSVYMATNIETGTSCAMKEVDLFPDDPKFADCIKQRHQEIRIHGQLHHPNIVQYYGSEVVGDQLRIYMEYVQLGSLNKFMHEHSGAMTESVVRNFTRHILSGLAYLHSTKTIHREIKCANLLVDASGIVKLAGFRMSKILTKKSSELLLNRSPYWMAPELMMVSMKKATNPNVAMAVDIWSLGCTVIEMLTGKPPWSEFSGHQAMFKTLHRSPDIPKILSPEGHDFLEQCFRRNPVERPSAAELLTHAFVQKKTLDPKINHVNIVQEAAQKIAAV 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00988 644 SUPERFAMILY Protein kinase-like (PK-like) 343 626 IPR011009 -
Tsu07g00988 644 Pfam Protein kinase domain 359 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00988 644 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 87 182 - -
Tsu07g00988 644 MobiDBLite consensus disorder prediction 19 51 - -
Tsu07g00988 644 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 232 623 - -
Tsu07g00988 644 Gene3D Transferase(Phosphotransferase) domain 1 355 642 - -
Tsu07g00988 644 MobiDBLite consensus disorder prediction 317 338 - -
Tsu07g00988 644 MobiDBLite consensus disorder prediction 235 300 - -
Tsu07g00988 644 ProSiteProfiles Protein kinase domain profile. 358 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00988 644 MobiDBLite consensus disorder prediction 200 300 - -
Tsu07g00988 644 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 232 623 - -
Tsu07g00988 644 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 87 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00988 Tsu-Chr7 8126722 8130260 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00988 319 640 MAP Kinase Kinase Kinase AT5G66850 57.530 8.78e-129 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Tsu07g00988 Pkinase 6.9e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00988 - - gmx:100781764 493.041