Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00984 atgaatatgaattttgaaGCAATGAATAGAAGctcttcaacaacaacatcatcatcagattCATGTTCATCAGAATCAAATCCAACGAACCAAAACAAACTAGACAGAATCAAAGGTCCATGGAGTGCAGAAGAAGATAGAATCCTAACCCGACTCGTTGAACAACATGGAGCAAGAAACTGGTCACTCATCAGCCGTTACATAAAAGGAAGGTCCGGAAAATCCTGTCGTCTCCGGTGGTGTAATCAACTCAGTCCAACGGTGGAGCACCGTCCATTCTCGCCGCAAGAAGATGATACAATCATTGCAGCTCATACTCAATACGGTAACCGTTGGGCTACCATTGCGCGTCTTTTACCTGGAAGAACTGATAATGCTGTGAAGAATCATTGGAATTCGACGCTTAAGCGAAGAGCGGGTTCTCGCGGTGGTTTTAGTGGCGGTGGTGATTCTGTTACGGTTGCCGGAACTGTTAGCGGTGGTAATGAAGGGGGAAGTTGTTCTGCTTTGGCGTTTGGAGATGATCCGTTGACCGCGTTGACTCTTGCTCCTCCGGGGAATGTTAATGGTTGTTATGTGGAAGATCGGGAAGAGACGGTTGTTGATCATCGGTTTCCTTCGCCGTCGCCGGAAAGTTTTCCGACGGGGTTTTGGGATGTGATGAAAGGTGTTATTGCAAAAGAAGTTAGAGAATATGTTTCTTCTAATTTTGCTCATAATAGTAACTCTGGTtttcattaa 741 0.4278 MNMNFEAMNRSSSTTTSSSDSCSSESNPTNQNKLDRIKGPWSAEEDRILTRLVEQHGARNWSLISRYIKGRSGKSCRLRWCNQLSPTVEHRPFSPQEDDTIIAAHTQYGNRWATIARLLPGRTDNAVKNHWNSTLKRRAGSRGGFSGGGDSVTVAGTVSGGNEGGSCSALAFGDDPLTALTLAPPGNVNGCYVEDREETVVDHRFPSPSPESFPTGFWDVMKGVIAKEVREYVSSNFAHNSNSGFH 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00984 246 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 90 139 IPR017930 -
Tsu07g00984 246 CDD SANT 92 135 IPR001005 -
Tsu07g00984 246 Gene3D - 92 138 - -
Tsu07g00984 246 Gene3D - 37 89 - -
Tsu07g00984 246 PANTHER MYB PROTEIN-RELATED 3 230 - -
Tsu07g00984 246 SUPERFAMILY Homeodomain-like 35 131 IPR009057 -
Tsu07g00984 246 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 88 IPR017930 -
Tsu07g00984 246 MobiDBLite consensus disorder prediction 1 36 - -
Tsu07g00984 246 Pfam Myb-like DNA-binding domain 41 99 - -
Tsu07g00984 246 ProSiteProfiles Myb-like domain profile. 85 135 IPR001005 -
Tsu07g00984 246 ProSiteProfiles Myb-like domain profile. 33 84 IPR001005 -
Tsu07g00984 246 CDD SANT 40 82 IPR001005 -
Tsu07g00984 246 MobiDBLite consensus disorder prediction 1 39 - -
Tsu07g00984 246 PANTHER MYB TRANSCRIPTION FACTOR 3 230 - -
Tsu07g00984 246 SMART sant 37 86 IPR001005 -
Tsu07g00984 246 SMART sant 89 137 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00984 Tsu-Chr7 8102009 8102923 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00984 26 170 MYB Transcription Factor Family AT4G37260 61.935 2.38e-59 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Tsu07g00984 Myb_DNA-bind_6 5.9e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00984 - - vra:106761536 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00984 07 8102009 8102923 Tsu07g00984 07 8102009 8102923 ECH