Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00956 ATGCGCAACCTTTTCAGTCTGCCTGGAGATTTTGGGTTCGACCCACTTGGGCTTGGAGAGGATCCTGAAAGCTTAAAGTGGTATGTGCAAGCAGAGTTGGTTCATGCTCGCTTTGCAATGCTTGGGATCTTTGGAATTCTAGTCACAGATCTACTTCGCGTCGCAGGAGTTAGTAGCATACCAGTTTGGTATGAAGCTGGTGCAGTAAAATTCGAGTTTGCAAACACGGGGACGCTCGTCGTTGTTCAGCTACTCTTGATGGGGTATGCCGAAACAAAAAGGTACATGGATTTTGTTAGTCCTGGATCTCAAGCTAAAGAGGGTTCCTTCTTTGGATTGGAAGCGTCACTTGGTGGCCTAGAGCCAGGGTATCCTGGAGGTCCTCTGCTAAATCCTCTTGGCCTAGCTAAAGACATTAAAAATGCACATGACTGGAAGCTTAAAGAGATCAagaatgGGCGACTTGCAATGGTGGCAATACTTGGCATCTTTGTACAAGCTTCAGTGACTCATGTTGGACCAATTGATAACCTTGTTGAGCATCTCTCAAATCCATGGCATAAAACTATTATTCAGACCCTTGCAAGTTCTAGTTCTTAG 600 0.45 MRNLFSLPGDFGFDPLGLGEDPESLKWYVQAELVHARFAMLGIFGILVTDLLRVAGVSSIPVWYEAGAVKFEFANTGTLVVVQLLLMGYAETKRYMDFVSPGSQAKEGSFFGLEASLGGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAILGIFVQASVTHVGPIDNLVEHLSNPWHKTIIQTLASSSS 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00956 199 Pfam Chlorophyll A-B binding protein 6 167 IPR022796 -
Tsu07g00956 199 Gene3D Chlorophyll a/b binding protein domain 4 199 - -
Tsu07g00956 199 PANTHER PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 5, CHLOROPLASTIC 6 196 - -
Tsu07g00956 199 SUPERFAMILY Chlorophyll a-b binding protein 6 196 - -
Tsu07g00956 199 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 6 196 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00956 Tsu-Chr7 7868992 7870826 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00956 6 191 Chloroplast and Mitochondria Gene Families AT3G61470 48.663 2.79e-54 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00956 K08911 - pvy:116125675 335.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00956 07 7868992 7870826 Tsu07g00956 07 7868992 7870826 ECH