Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00943 ATGGCTCTTCTACTAGACAACTGTGAAGGCATTTTACTCTCACTAGATTCTCACAAATCAGTCCCAGCTCCATTCCTCACCAAAACATACCAACTCGTTGACGATCCTTCCACAGATCACATCGTCTCTTGGGGAGAAGACGATTCCACCTTCGTTGTCTGGCGTCCTCCAGAATTTGCTAGAGACCTCCTCCCTAACTACTTCAAACACAACAACTTCTCAAGCTTCGTTCGCCAACTCAACAcctatggttttaggaAGATTGTACCTGATAGATGGGAATTTGCtaatgaatatttcaaaaaaggtgaaaaacatTTACTTTGTGAGATTCATAGAAGAAAAACAACACAGCCACAACAAACTGGAAtcaatcatcttcatcatcaccaCCAGCATCAAAATGTTCCACCAAGTTTCTTTCCATTTTCAAACACTAGAGTAAGCATTTCTCCACCTAATGATCATTACTCTGATGAACATTTCAACAATTGGTCTTGTGATTCTTCACCTTTAACTTCACCATCATTCATCAATGGaggaacaacaacaacaacaacagcagcagcaacaacaaataACTACAATACTTCTGTTACTGCTCTTTCTGAAGATAATGAAAGATTAAGAAGAAGTAATAACATGTTAATGTCTGAGTTAGCTCATATGAAGAAGCTTTACAATGATATAATCTATTTTGTTCAGAATCATGTTAAGCCGGTAACTCCGAGTAATACTTACTCTTCTTCATTTTTACTTCCACAAGCTTCTTCAAATTCTATGAATGTTGGTGGTGGTAATGTTTCGATGGTGCAAAGGCCAATGAATAATCATAGTCAGAATCAGAATCAGCTTTTGGGGTATTATTGTAATaacactaataataacaataatagcCCTAAAAATGTTACTCAGTTTCAAGCAGCTCAAAATCAATCACATGCTATGAATGTGAACTCTCCAACAAACACATCAAGAAGTTCTATTACAATGGTTGAAGGGCATACCAGTAataacaacagcagcagcaagACTAAGCTTTTTGGAGTATCACTACAGTCCAACAAGAAAAGAGTGCACCCTGAATGTGGATCTAATAATCCAAATAATTTGGAAACCAACAAAGCTCgtttgattttggatcaaaaagaTCATGACTTTGATTTGGGTTTGAATCTTATGCCTCCTTCCACTTGTTAG 1200 0.3233 MALLLDNCEGILLSLDSHKSVPAPFLTKTYQLVDDPSTDHIVSWGEDDSTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEYFKKGEKHLLCEIHRRKTTQPQQTGINHLHHHHQHQNVPPSFFPFSNTRVSISPPNDHYSDEHFNNWSCDSSPLTSPSFINGGTTTTTTAAATTNNYNTSVTALSEDNERLRRSNNMLMSELAHMKKLYNDIIYFVQNHVKPVTPSNTYSSSFLLPQASSNSMNVGGGNVSMVQRPMNNHSQNQNQLLGYYCNNTNNNNNSPKNVTQFQAAQNQSHAMNVNSPTNTSRSSITMVEGHTSNNNSSSKTKLFGVSLQSNKKRVHPECGSNNPNNLETNKARLILDQKDHDFDLGLNLMPPSTC 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00943 399 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tsu07g00943 399 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 318 398 IPR027725 -
Tsu07g00943 399 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 12 247 IPR027725 -
Tsu07g00943 399 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tsu07g00943 399 PANTHER BNAC06G00310D PROTEIN 318 398 - -
Tsu07g00943 399 PANTHER BNAC06G00310D PROTEIN 12 247 - -
Tsu07g00943 399 Coils Coil 199 219 - -
Tsu07g00943 399 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
Tsu07g00943 399 Gene3D - 17 116 IPR036388 -
Tsu07g00943 399 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tsu07g00943 399 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tsu07g00943 399 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tsu07g00943 399 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00943 Tsu-Chr7 7773508 7775226 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00943 1 398 HSF AT1G46264 52.871 2.69e-120 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Tsu07g00943 HSF_DNA-bind 1.9e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00943 K09419 - gmx:100781389 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00943 07 7773508 7775226 Tsu07g00943 07 7773508 7775226 ECH