Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00942 ATGATGAATTTGCCTATAGTGCAACGTGTTTCGGAATGTTTTATCAAACCACTACACCCCATTCCAGAGTCAAACCAAATATGTTATTTGACGACATGGGATATTGCCATGTCTTCAATGAACTACATCGAGAAAGGCCTTTTATTCAAAAAACCAACACAACCAAATAACCAACAAGATTTCGTCGAAAAGCTATTGGAGAAGCTTAAAAACTCACTCTCTATTGCTCTATTCCATTTCTATCCTTTGTCTGGTCGTCTCGTTACACAAAAATCTCAAGACCCTCCctcttatgttatttttgttgattgCAGTAACAATAACCCCGGAGCTAAATTCATCTACGCAACTTTGGATATGACCGTATCTGATATCCTTACCCCGATCGATGTTCCACTGGTTGTTAAGTCATTGTTTGATCTCGACAATGCAATCAATCACGACGGTCATACCCTGCCCTTGTTATCTATACAAGTCACTGAGCTAGTGGACGGTGTTTTCGTAGGTTGTTCCATGAATCACTATATTGGTGATGGAACTTCTTATTGGaagttttttaatatatggTCGGAAATATTTCAAGCTCAAGGCCAAGATGTTCCCATTTCGCGCCAACCCTTTCACAATCGCTGGTTTCCTGAAGGTTATGGTCCACTAATCAATCTTCCATTTGAACATCATGACGAGTTTATAAGTAGATATGAACCACCCGAGCTGGTAGAGAGATTCTTCCACTTTACAGCAGAGTCTATCGCAAAATTGAAAGCAAAGGCCAATATGGAGTCTAATACAAACAAAATCTCGTCGTTACAGTCCTTAACCGCACATGTTTGGAGATGTATAACTCGTGCTCGCGGAATATCAAATGATCAAGTAACAACTTGTATGTTAGCTGTAAACAATAGACCGAGAATTAAACCATCTCTTCCGGAAGAGTACTTTGGGACCTCAATTGATACGGTAGGTACACAATCGACTGTAGGAGAATTGCTTGAGAATGATTTGGGATGGGCAGCATTGAAGGTGCATGTTGCTATTGCAAACCATGACGACCTAGTGGTGCGAAAGTTAGTCAAAAAGTGGTTAGAGTCTCCGACTATATTCAGCCTTAACCGCCACTTGCCTCCCTTCAGTGTGGCGATGATAAGTTCACCGAGGTTTAATATGTATGGGAATGAATTTGGAATGGGGAAACCAGTGGCAGTTCTGAGTGGTCATGCAAACAAATGTGATGGTAATGTGACATCATACGAGGGGCGCGAAGGAGGGGGGAGTATAGATTTTGAAATTTCTCTTTCTCCGAATGCTATGAGAGCGCTCGAATTGGACGAAAATTTCATGAATGCAGCTTCTGTGACCAATCCCTCTAAGTAA 1374 0.4047 MMNLPIVQRVSECFIKPLHPIPESNQICYLTTWDIAMSSMNYIEKGLLFKKPTQPNNQQDFVEKLLEKLKNSLSIALFHFYPLSGRLVTQKSQDPPSYVIFVDCSNNNPGAKFIYATLDMTVSDILTPIDVPLVVKSLFDLDNAINHDGHTLPLLSIQVTELVDGVFVGCSMNHYIGDGTSYWKFFNIWSEIFQAQGQDVPISRQPFHNRWFPEGYGPLINLPFEHHDEFISRYEPPELVERFFHFTAESIAKLKAKANMESNTNKISSLQSLTAHVWRCITRARGISNDQVTTCMLAVNNRPRIKPSLPEEYFGTSIDTVGTQSTVGELLENDLGWAALKVHVAIANHDDLVVRKLVKKWLESPTIFSLNRHLPPFSVAMISSPRFNMYGNEFGMGKPVAVLSGHANKCDGNVTSYEGREGGGSIDFEISLSPNAMRALELDENFMNAASVTNPSK 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00942 457 Gene3D - 231 442 IPR023213 -
Tsu07g00942 457 Gene3D - 2 217 IPR023213 -
Tsu07g00942 457 Pfam Transferase family 11 445 - -
Tsu07g00942 457 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 450 - -
Tsu07g00942 457 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00942 Tsu-Chr7 7747875 7749429 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00942 49 441 Monolignol Biosynthesis Gene Families AT5G48930 29.612 3.17e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00942 - - lja:Lj1g3v1664450.1 664.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00942 07 7747875 7749429 Tsu07g00942 07 7747875 7749429 ECH