Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00941 ATGATGAGTTCATTTACAGTTCAAAGTGTTTCAGAATGTTTTATCAAACCACTTTTCTCCATTCAAGAATCAAAACAAATATGCTATTTAACAACTTGGGATATTTCAATGTTATCTATGCATTACATCCAAAAGGGCTTGTTATTCAAAAAGCCACCACCTCCAAATAATCAAAAAGATTTCATTGATAATCTTTTGGAGAATCTCAAACAATCTATTTCTCTAGCTCTCTTCCATTTTTATCCACTATCCGGTCGCCTTGTCACCCGCAAAACTCAAGATCCTCCAACTTATTCGGTTTTCGTTGATTGTAGTAATGATAACCCGGGAGCTAGATTCATCTATGCAACTTTGGATGCAACTATTTATGACATCCTATCGCCGGTTGATCATCCACCGGTTGTGGAGTCATTGTTTGATCTCGATAGAGCAATCAATCATGATGGTCATACCATGCCATTGTTATCCATTCAAGTAACTGAGCTAGTGGATGGTGTTTTCTTAGGTTGTTCCATGAATCATTGTATTGGTGATGGGACTTCTTTTTGGAATTTCTTTAATGTATGGTCGGAAATATTTCAAGCTCGAGAGAAAGGTCGCGATGCTGTTGTGTCACACCAACCATTTCACAATCGTTGGTTCCTAGAAGGTTGCGGTCCACTAATTAATCTTCCGTTCAAACATCATGACGAGTTTACAAGTAGATTTGAAGCGCCAAAGTTAAGAGAGAGATTCTTCCATTTTAGCGCGGAGTCTATTGCAAAACTGAAAGCCAAGGCCAATGAGGAAGCTAATACAAATGAAATCTCTTCATTCCAATCAATATCGGCTTTTCTATGGAGATCTGTGACACGTGCACGCGGACTAGCACATGATCAAAAAGTTAGTTGTAAGTTAGCCATAAACAATAGACCAAGAATCAAGCCACCTCTCCCGAAAGAGTACTTTGGAAACTCGGTTGATGTGGTGAGTACTGAAACGACTGTAGGGGAATTGCTTGAGAATGATTTGGGATGGGCGGCGTGGAAGGTGCATACACTTGTTGTGAATCATGATGACACAGAGGTGAGAGAGATGTACGAAAAGTGGTTAGAGTCTCCTATCGTCTATCAACTTGGTCGCCACTTTGATCCTTTCAGCATGGTGATGTCAAGTTCACCGAGATTCAATATGTATGGGAATGAATTTGGAATGGGGAAAGCGGTCGCAGTACTAAGCGGCTATGCAAACAAATTTAATGGGAATGTAACAGCTTATGAGGGATATGAAGGAGGGGGAAGCATGGTTTTAGCAGTGTCTCTTTTGCCTGATGTAATGGGTGCGCTAGAATTAGACGAGGATTTTATGAATGTAATTTCTGTGGCCAATTTCGCTAATATGCCATGA 1386 0.4019 MMSSFTVQSVSECFIKPLFSIQESKQICYLTTWDISMLSMHYIQKGLLFKKPPPPNNQKDFIDNLLENLKQSISLALFHFYPLSGRLVTRKTQDPPTYSVFVDCSNDNPGARFIYATLDATIYDILSPVDHPPVVESLFDLDRAINHDGHTMPLLSIQVTELVDGVFLGCSMNHCIGDGTSFWNFFNVWSEIFQAREKGRDAVVSHQPFHNRWFLEGCGPLINLPFKHHDEFTSRFEAPKLRERFFHFSAESIAKLKAKANEEANTNEISSFQSISAFLWRSVTRARGLAHDQKVSCKLAINNRPRIKPPLPKEYFGNSVDVVSTETTVGELLENDLGWAAWKVHTLVVNHDDTEVREMYEKWLESPIVYQLGRHFDPFSMVMSSSPRFNMYGNEFGMGKAVAVLSGYANKFNGNVTAYEGYEGGGSMVLAVSLLPDVMGALELDEDFMNVISVANFANMP 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00941 461 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 452 - -
Tsu07g00941 461 Gene3D - 227 444 IPR023213 -
Tsu07g00941 461 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 452 - -
Tsu07g00941 461 Pfam Transferase family 10 446 - -
Tsu07g00941 461 Gene3D - 3 219 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00941 Tsu-Chr7 7745151 7746725 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00941 55 443 Monolignol Biosynthesis Gene Families AT5G48930 28.117 1.76e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00941 - - lja:Lj1g3v1664450.1 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00941 07 7745151 7746725 Tsu07g00941 07 7745151 7746725 ECH