Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00940 ATGACTTCCTCTATTGCTCGAAGAGTTTCAGAATGTTTTATTAGACCCCTACATCCTATTGAAGATTCAAACCAAGTTTGTTATTTAACAGGTTGGGATATTGCTATGTCATCTATGCACTATATCCAAAAAGGCCTATTATTCAAAAAGCCTCAAACATCACCAAATAACCAACAAGATTTCATTGAGAATTTGTTGAAGAATCTCAAAAACTCCCTCTCCCATGCTCTTTTCTATTTCTATCCTCTTTCTGGTCATCTTGTCACCCACAAAACTGAAGATCCTCCCTCTTATACTATTTTTGTTGATTGTAGTAACAATAACCCCGGAGCTAGATTCATCTATGCAACCGCGGAAGCGACCATTTCTGATATCCTCTCACCGGTTGATGTTCCTCCCGTTGTTGAGTCATTTTTTGATCTCAACAAAGCAACCAATCATGACGGTCACACCATGCCGTTGTTATCAATTCAAGTCACGGAGCTCGTTGATGGTGTTTTTATAGGTTGTTCCATGAATCATTGTATTGGTGACGGTACTTCTTTctggaatttttttaatatatggtcCGAGATATTTCAATCTCAagattatgaaaatgaaaacaaaattgttctCATTTCGCGCCAACCATTTCACAATCGTTGGTTTCCAGAAGGCTACGGTCCACCAACGAACCTTCCCTTCAAACATCACCAAGAGTTCATTAGCAAATATCAATCTCCAATCTTCAGAGATAGATTCTTCCATTTTACACAAGATTATATTGCAAGACTAAAAACAAAGGCGAATAAAGAGTTTAACACAACAAAAATATCTTCATTTCAGGCCTTATCAGCACATGTTTGGCGATGTGTGACACGCGCACGCCAACTACCAAACAATCAAAAAACAAGTTGTAAGTTAGCGATAAATAATCGACCAAGAATGGAACCACCTTTGCCAAATGAGTATTTTGGAAATGCAGTTGATGTGGTTAGCGTCGAAACAACTGTTGAGGAGTTGCTTCAGAACAATCTAGGATGGGCAGCAATGAAGGTCAATGAAATTGTGGTGAATCATGATGACAAAGAAGTGAGAAAAATGTTAAAGGAGTGGTTAGAGTCTCCTATTGTATACCAACTTGGTTGTCACTTTGATCCTCACAGTATCACAGTGTCAAGTTCACCAAGGTTCAATATGTATGGGAATGAATTTGGAATGGGGAAAGCCATAGCTGTTCTTAGTGGATATGCTAACAAATTTGATGGTAATGTGTCATCATATCAAGGGTATGAAGAGGGAAGCATAGATTTGGCATTGACTCTTATGCCTGATGCAATGAAGGCATTGGAATCAGATGAAGAGTTCATGAATgcagtttga 1365 0.3707 MTSSIARRVSECFIRPLHPIEDSNQVCYLTGWDIAMSSMHYIQKGLLFKKPQTSPNNQQDFIENLLKNLKNSLSHALFYFYPLSGHLVTHKTEDPPSYTIFVDCSNNNPGARFIYATAEATISDILSPVDVPPVVESFFDLNKATNHDGHTMPLLSIQVTELVDGVFIGCSMNHCIGDGTSFWNFFNIWSEIFQSQDYENENKIVLISRQPFHNRWFPEGYGPPTNLPFKHHQEFISKYQSPIFRDRFFHFTQDYIARLKTKANKEFNTTKISSFQALSAHVWRCVTRARQLPNNQKTSCKLAINNRPRMEPPLPNEYFGNAVDVVSVETTVEELLQNNLGWAAMKVNEIVVNHDDKEVRKMLKEWLESPIVYQLGCHFDPHSITVSSSPRFNMYGNEFGMGKAIAVLSGYANKFDGNVSSYQGYEEGSIDLALTLMPDAMKALESDEEFMNAV 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00940 454 Pfam Transferase family 26 451 - -
Tsu07g00940 454 Gene3D - 231 446 IPR023213 -
Tsu07g00940 454 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 453 - -
Tsu07g00940 454 Gene3D - 3 223 IPR023213 -
Tsu07g00940 454 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00940 Tsu-Chr7 7741797 7743305 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00940 69 445 Monolignol Biosynthesis Gene Families AT5G48930 29.442 7.93e-40 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00940 - - lja:Lj1g3v1664450.1 645.58