Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00939 ATGAGAACTCCTTCTCTTACACTTGTTTCTGAATGTTTCATCAAACCATATACCTCAATTGAAGACTCAAAACAAATATGCTATCTAGCACCTTGGGATATTGCTATGTTATCTACACACTATATCCAAAAGGGTCTTCTCTTTAAAAaaccaacatcatcatcatcaaagcaACAACATTTCATTGAGAATCTAGTACACAAACTCAAACATTCTCTTTCTCTCACACTTTACCATTTCTATCCTCTCTCAGGTCGTCTTGTTATCAAGAAAACCGAACATCCACCTTCTTACTCTGTTTATGTAGATTGCAAAAACAGTCTTGGAGCTAAATTTATTCATGCAACTTTAGACATTAACATTAATGATATTCTCTCACCTATTGATGTCCCACACATTGTTCATTCGTTTTTTGACCATCACAAAGCACAAAACCATGATGGTTGCACCATGTCTTTATTGTCTATTCAAGTAACTGAATTATTGGATGGTGTTTTCATAGGTTGTTCCATGAACCACTGCATTGGTGATGGAACTGCTTATTGGAATTTCTTTAACACATTTTCCGAGATATTTCAAAATGATACTGCTCCCATATCACATCAACCTATCAACACCAGATGGTTTCCAGAAGGTTATGGTCCAATTATCAATCTCCCTTTCAAACATGAAGACGAGTTTATTTATAGATATAATGAAACACCCATTTTGAGAGAGagaatatttcatttttcagcAGAGTCTATAGCCAAACTTAAAGCAAAAGCTAACATAGAGTCTAATACAAACAAAATCTCTTCGTTTCAATCTTTATCAGCATTGGTTTGGAGATCTATAACTCGTGCACGTCAACTAGAACATGATCAAAGAACAACTTGTAAGTTGGCTGTAAACAATCGAACAAGAATGAAACCGTCTCTTCCTAACGAATATTTTGGAAATTCAATTTCTGCAACGAGTACTGAAACGAAAGTAAGAGAGTTGTTGGAGAATAATCTAGGATGGGCAGCATGGAAGATTCATATGGCTATTACGAATCATGATGATAAAGCGGTGAGAAATTGGGTCGAAGAGTGGTTACATTCACCTTTTGTGTATAGAATGGATTTGTTCTTTGATCCTTATACTGTGATGATGGGTAGTTCACCAAGGTTTAATATGTATGGGAATGAATTTGGAATGGGAAAAGCTTTAGGTGTTAGAAGTGGGTATGCTAATAAATTTGATGGAAAGATAACATCATATCCAGGTCAAGAAGGAGGAGGGAGCATTgatcttgaagtgtgtctttcACCAGATAAAATGATGGCGCTGGAAACCGATGAAGAGTTCATGAGTTCAACTTCGGTTTTTAATCCATTGATTTAG 1368 0.3414 MRTPSLTLVSECFIKPYTSIEDSKQICYLAPWDIAMLSTHYIQKGLLFKKPTSSSSKQQHFIENLVHKLKHSLSLTLYHFYPLSGRLVIKKTEHPPSYSVYVDCKNSLGAKFIHATLDININDILSPIDVPHIVHSFFDHHKAQNHDGCTMSLLSIQVTELLDGVFIGCSMNHCIGDGTAYWNFFNTFSEIFQNDTAPISHQPINTRWFPEGYGPIINLPFKHEDEFIYRYNETPILRERIFHFSAESIAKLKAKANIESNTNKISSFQSLSALVWRSITRARQLEHDQRTTCKLAVNNRTRMKPSLPNEYFGNSISATSTETKVRELLENNLGWAAWKIHMAITNHDDKAVRNWVEEWLHSPFVYRMDLFFDPYTVMMGSSPRFNMYGNEFGMGKALGVRSGYANKFDGKITSYPGQEGGGSIDLEVCLSPDKMMALETDEEFMSSTSVFNPLI 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00939 455 Gene3D - 6 215 IPR023213 -
Tsu07g00939 455 Pfam Transferase family 7 445 - -
Tsu07g00939 455 Gene3D - 228 440 IPR023213 -
Tsu07g00939 455 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 3 447 - -
Tsu07g00939 455 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00939 Tsu-Chr7 7735863 7737230 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00939 48 439 Monolignol Biosynthesis Gene Families AT5G48930 26.392 1.56e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00939 - - gmx:100787228 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00939 07 7735863 7737230 Tsu07g00939 07 7735863 7737230 ECH