Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00937 ATGACGATCACTCCTTCTCTTACACTTGTTTCTGAATCTTTCATCAAACCATATCCCTCAATTGAAGACTCAAAACAAATATGCTATTTAGCACCTTGGGATATTGCTATGTTATCTACACACTATATCCAAAAGGGTCTTCTCTTTAAAAaaccaacatcatcatcatcatcatcattaaaccAACAATATTTCATTGAGAATCTAGTACACAAACTCAAacactctctttctctcacaCTTTACCATTTCTATCCTCTCTCAGGTCGTCTTGTTATCAAGAAAACCGAACATCCTCCTTCGTATTCTGTTTATGTAGATTGCAAAAACAGTCTTGGAGCTAAATTTATTCATGCAACTTTAGATGTCACCATCAATGATATTCTCTCACCTGCTGATGTCCCACATATTGTTCATTCGTTTTTCGATCACCATAAAGCACTCAGCCATGATGGTTGCACGATGTCTTTGTTGTCTATTCAAGTAACTGAATTATTGGATGGTGTTTTCATAGGTTGTTCCATGAACCATTGTATTGGTGATGGAACTGCTTATTGGAATTTCTTTAACACATTTTCCGAGATATTTCAAAATGATGATCGTGTTTCTAGTCCCATTTCCCATCAACCTATCAACACTAAATGGTTTCCAGAAGGTTATGGTCCAATTATCAACCTCCCTTTCAAACATGAAGACGAGTTTATTTATAGATATGATGAAACAACCATTTTGAGAGAGagaatatttcatttttcagcAGAGTCTATAGCGAAACTTAAAGCAAAAGCAAACAAATTATCGAATACAACCAAAATCTCTTCGTTTCAATCTTTATCAGCATTGATTTGGAGATCTATAACTCGTGCACGCCAACTAAAACATAATCAAAGAACGACTATTAAGTTGGCTGTAAACAATCGAACAAGAATGAAACCGTCTCTTTCTAACGAATATTTTGGGAATTCAATTTCTGCAGCGAGTACTGAAACGAAAGTAGGGGAGTTGTTGGAGAATGATCTAGGATGGGTAGCATGGAAGATTCATATCGCCATTACAAATCATGATGATAAAGTGGTAAGAAATTGGGTTGAAGAGTGGTTACATTCACCTTTTGTGTATAAATCAGATTTGTTCTTTGATCCTTATACTGTGATGATGGGTAGTTCACCAAGGTTTAATATGTATGGGAATGAATTTGGAATGGGAAAAGCTTTAGGTGTTAGAAGTGGGTATGCTAATAAATttgatggaaaaataacatcatATCCAGGTCAAGAAGGAGGAGGGAGCATTgatcttgaagtgtgtctttcACCAAATAAAATGATGGCGCTAGAAACTGATGAAGAGTTCATAAGTTCAACTTCGTTTTTCAATCCATTGTTCTAG 1389 0.329 MTITPSLTLVSESFIKPYPSIEDSKQICYLAPWDIAMLSTHYIQKGLLFKKPTSSSSSSLNQQYFIENLVHKLKHSLSLTLYHFYPLSGRLVIKKTEHPPSYSVYVDCKNSLGAKFIHATLDVTINDILSPADVPHIVHSFFDHHKALSHDGCTMSLLSIQVTELLDGVFIGCSMNHCIGDGTAYWNFFNTFSEIFQNDDRVSSPISHQPINTKWFPEGYGPIINLPFKHEDEFIYRYDETTILRERIFHFSAESIAKLKAKANKLSNTTKISSFQSLSALIWRSITRARQLKHNQRTTIKLAVNNRTRMKPSLSNEYFGNSISAASTETKVGELLENDLGWVAWKIHIAITNHDDKVVRNWVEEWLHSPFVYKSDLFFDPYTVMMGSSPRFNMYGNEFGMGKALGVRSGYANKFDGKITSYPGQEGGGSIDLEVCLSPNKMMALETDEEFISSTSFFNPLF 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00937 462 Gene3D - 7 218 IPR023213 -
Tsu07g00937 462 Pfam Transferase family 7 451 - -
Tsu07g00937 462 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 4 454 - -
Tsu07g00937 462 Gene3D - 236 447 IPR023213 -
Tsu07g00937 462 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 4 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00937 Tsu-Chr7 7728468 7729856 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00937 49 446 Monolignol Biosynthesis Gene Families AT5G48930 26.253 8.07e-29 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00937 - - gmx:100787228 623.624