Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00935 ATGAGCACCCCTTCTCTTAAACTTGTTTCTGAATGTTTTATCAAACCATATCCCCCAATcgaaaattcaaaacaaatatgCTATTTAGCACCTTGGgatattattatgttatattCACACTATATCCAAAAGGGTCTTCTCTTCAaaaaaccatcatcatcatcactaaaCCAGCAACCTTTCATTGAGAACCTGGTTGACAAACTCAAACACTCCCTTTCTCTCACACTTTTCCATTTCTATCCCCTCTCAGGTCGTCTTGTTACACAGAAAACCCAAGACCCTCCTTCTTacaatgtttttgttgattgcAAAAACAGTGACGGAGCTAAATTTATCCATTCAACTTTAGATATAACCATAAATGATATCCTCTCACCCATTGACGTCCCGCCGATTGTTCAATCCTTTTTTGACCACCACAGAGCAGTTAACCATGATGGTCACACCATGTCTTTGTTGTCTATTCAAGTAACTGAATTAATCGATGGTGTTTTCATAGGTTGTTCCATGAACCATTCTATAGGTGATGGAACTGCTTATTGGAATTTCTTTAACACATTTTCTGAGATATTTCAAAATGGTGATAATCTTCTTCCAATTTCACATCAACCTATCCACAATAAATGGTTTCCAGAAGGTTATGGTCCAATTATCAACCTTCCTTTCAAACATCACGACGAGTTTATTCGTAGTCATGAATCACCCATTTTGAGAGAGAGGATCTTCCATTTTTCAGCAGAGTCTAtagcaaaattaaaatcaaaggcTAACAAAGAATCTAATACAAACAAAATCTCTTCATTTCAATCTTTATCAGCACTAGTTTGGAGATCTATAACTCGTGTACGTCAGCTACAACATGATCAAAAAACGATTTGCAAATTGGCTATAAATAACCGAACTAGAATGGAACCATCTCTTCCAAAGGAATATTTTGGAAGTTTAGCTTATGCAGTGAGGACTGAAACAACGGTAAGGGAATTATTAGAGAACGATCTAGGATGGGCAGCATGTAACATTCATCTTGCCATTGCAACATATGATGACAAAGTTGTGCGACAATTAACAAACGAGTGGTTACAATCTCCAATTGTGCCTCGAATGGACATGTTGTTTGAAGCTAATATGGTGTTGATGGGTAGTTCACCTAGGTTTGATATGTATGGGAATGAATTTGGAATGGGAAAAGCTTTAGGTGTTAGAAGTGGGTATGCTAATAAATttgatggaaaaataacatcatATCCAGGTCAAGAAGGAGGAGGGAGCATTgatcttgaagtgtgtctttcACCAGATAAAATGATGGCGCTGGAAACTGATGAAGAGTTCATGAGTTCAACTTCGGTATTTAATCTTTTGTTCTAG 1371 0.3392 MSTPSLKLVSECFIKPYPPIENSKQICYLAPWDIIMLYSHYIQKGLLFKKPSSSSLNQQPFIENLVDKLKHSLSLTLFHFYPLSGRLVTQKTQDPPSYNVFVDCKNSDGAKFIHSTLDITINDILSPIDVPPIVQSFFDHHRAVNHDGHTMSLLSIQVTELIDGVFIGCSMNHSIGDGTAYWNFFNTFSEIFQNGDNLLPISHQPIHNKWFPEGYGPIINLPFKHHDEFIRSHESPILRERIFHFSAESIAKLKSKANKESNTNKISSFQSLSALVWRSITRVRQLQHDQKTICKLAINNRTRMEPSLPKEYFGSLAYAVRTETTVRELLENDLGWAACNIHLAIATYDDKVVRQLTNEWLQSPIVPRMDMLFEANMVLMGSSPRFDMYGNEFGMGKALGVRSGYANKFDGKITSYPGQEGGGSIDLEVCLSPDKMMALETDEEFMSSTSVFNLLF 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00935 456 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 448 - -
Tsu07g00935 456 Gene3D - 6 217 IPR023213 -
Tsu07g00935 456 Gene3D - 225 441 IPR023213 -
Tsu07g00935 456 Pfam Transferase family 11 446 - -
Tsu07g00935 456 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00935 Tsu-Chr7 7701234 7706761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00935 69 440 Monolignol Biosynthesis Gene Families AT5G48930 25.628 1.11e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00935 - - gmx:100792511 671.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00935 07 7701234 7706761 Tsu07g00935 07 7701234 7706761 ECH