Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00929 ATGGCGCTAAACAAAAACATCTTCATCAACCTCTCACTTTTACTACTACTACTCTCAACTCTTACTACATTCTCCAACTCctccaaacacaaaaacaacatcacaCTCTCAGATCCTACTTCACTGTTAGCATTCAAATCAAAAGCTGACATTAACAACCACCTCAACTTCACCACCAAAACTCCCTTCTGCAACTGGCAAGGTGTTCAATGCAACAAACAACACAAAGTAATCCGTCTCATCCTCCGTAATTTAGATCTCGCCGGAGTTTTTCCTCCTCACACATTATCCAATCTCGATCAACTCCGTGTCCTCAGTCTCCAAAACAACTCCCTCACCGGAACAATACCAAATCTCTCCGGTCTCTTAAATCTCAAAACTCTCTTTCTTGATAATAACTACTTCACTGGTCCTATTCCTCTTtctattttctctcttcatAGACTCAAAACGTTAGATTTCTCTCATAACAATCTTTCCGGAACTATTCCTATAGATTTCGTTAACCTTGATCGACTTTACTATCTTCGTTTAAGCTTTAACGCTTTTAACGGTAGTGTTCCTCCTTTTAATCAGTCTTCTCTTCGAACATTTGATGTTTCTAGTAACAATCTCTCGGGCGCAGTTCCGTTAACCGCCACACTATCTCGTTTTCAGCCGTCGTCGTTTGCTTTAAATCCTAATCTCTGTGGAGAGATTATTCGGAGAGAATGTCGTCCGAGTGTGCCGTTTTTCGCTCCGACTACGCCGCCGACGGTTGGACTTAACCAGAGTGCGAAGGTTCATGGATTAATCCGGCAGCCGTATCAGAAGAAACACGATCGGAGAAAGGTGATTATAGGATTCTCTAGTGGAATCTTTGTTCTGTTAATCTCGTTAGCGTGTTTTGCTGTGGTGATTAAGAAACAGAGAAAAAAGAAAGGTAAAGGCTCTGGTTCGAGTGTGATGGCTTCAGATGCGGCGGCGACGGCGGAAGCAGCGGTTGTGATGCAAATGGAGCAAGAGAGAGAGTTAGAAGAAAAGGTAAAGAGAGCGCAAGTTGCGAAGAGTGGGAGTTTAATATTCTGTGCGGGTGAATCGCAGGTGTATACGCTGGACCAGTTGATGAAAGGATCTGCAGAGCTTTTAGGTAGAGGGTGTTTAGGAACAACTTATAAAGCAGTGCTTGATAACCGTTTGATTGTAACAGTGAAGCGTCTTGATTGTGGGAAAATGGGTGTGCACGTTAATAAGGATGTATTTGAGCGTCACATGGAATCAGTTGGTGGTCTTCGTCATCCGAATTTGGTTCCTCTAAGAGCTTATTTTCAGGCTAATCAAGAGAGATTAATTATCTATGATTATCAACCTAATGGCAGTTTATTCTCCCTCATACATGGTTCCAAATCAAGCAGGGCAAGGCCATTACACTGGACATCATGCTTAAAAATAGCAGAGGATGTAGCACAAGGGCTTTCCTACATCCACCAGGCATGGAGACTGGTCCATGGCAATCTCAAGTCCACCAATGTACTCCTAGGACCTGATTTTGAGGCTTGCATCACAGATTACTGTCTGTCTGTGTTGAGCAACACTTCTACCTTTGATGAGGTTGGTGATTCTGCACCCTATAGAGCTCCAGAGACTCGCAATCCGAATCACCAGCCAACCACCAAATCCGACGTTTATGCTTATGGTATTTTGTTGCTAGAGCTTCTGACTGGGAAGTATGCTTCTGAGCTCCCATTCATGGTTCCTGGGGATATGTCAAGATGGGTGAGATCTATTAGGGATGACAACGGGAGCGAAGACAATAGAATGGATATGCTTCTTCAGGTAGCTACAACTTGTAGCTTGATCTCTCCAGAGCAGAGGCCCACAATGTGGCAGGTCTTGAAGATGTTACAGGAAATTAAAGAGATTGTATTATTGGAGGATAGTGAACTGGACCTAAGCAGTAATAATGTCATTGCCATGTCTTAG 1962 0.4251 MALNKNIFINLSLLLLLLSTLTTFSNSSKHKNNITLSDPTSLLAFKSKADINNHLNFTTKTPFCNWQGVQCNKQHKVIRLILRNLDLAGVFPPHTLSNLDQLRVLSLQNNSLTGTIPNLSGLLNLKTLFLDNNYFTGPIPLSIFSLHRLKTLDFSHNNLSGTIPIDFVNLDRLYYLRLSFNAFNGSVPPFNQSSLRTFDVSSNNLSGAVPLTATLSRFQPSSFALNPNLCGEIIRRECRPSVPFFAPTTPPTVGLNQSAKVHGLIRQPYQKKHDRRKVIIGFSSGIFVLLISLACFAVVIKKQRKKKGKGSGSSVMASDAAATAEAAVVMQMEQERELEEKVKRAQVAKSGSLIFCAGESQVYTLDQLMKGSAELLGRGCLGTTYKAVLDNRLIVTVKRLDCGKMGVHVNKDVFERHMESVGGLRHPNLVPLRAYFQANQERLIIYDYQPNGSLFSLIHGSKSSRARPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSTNVLLGPDFEACITDYCLSVLSNTSTFDEVGDSAPYRAPETRNPNHQPTTKSDVYAYGILLLELLTGKYASELPFMVPGDMSRWVRSIRDDNGSEDNRMDMLLQVATTCSLISPEQRPTMWQVLKMLQEIKEIVLLEDSELDLSSNNVIAMS 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00929 653 Gene3D Ribonuclease Inhibitor 193 231 IPR032675 -
Tsu07g00929 653 Pfam Leucine rich repeat 124 182 IPR001611 GO:0005515
Tsu07g00929 653 SUPERFAMILY Protein kinase-like (PK-like) 374 633 IPR011009 -
Tsu07g00929 653 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 11 640 - -
Tsu07g00929 653 Gene3D Transferase(Phosphotransferase) domain 1 450 642 - -
Tsu07g00929 653 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 640 - -
Tsu07g00929 653 Gene3D Ribonuclease Inhibitor 35 191 IPR032675 -
Tsu07g00929 653 ProSiteProfiles Protein kinase domain profile. 370 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00929 653 SUPERFAMILY L domain-like 38 230 - -
Tsu07g00929 653 Pfam Protein kinase domain 374 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00929 653 ProSiteProfiles Leucine-rich repeat profile. 101 123 IPR001611 GO:0005515
Tsu07g00929 653 Gene3D Phosphorylase Kinase; domain 1 337 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00929 Tsu-Chr7 7640270 7644577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00929 38 648 Receptor kinase-like Gene Family AT5G43020 58.768 0.0 699
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tsu07g00929 Pkinase 3.3e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00929 - - cam:101511242 1082.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00929 07 7640270 7644577 Tsu07g00929 07 7640270 7644577 ECH