Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00926 ATGTTCCTTTTGGATACCTTGTACTGCTCAGAACAACATTGGgaggaagaagaacaagaacaagatgAGTACGATAATGTTTCCTTAAACAACAACACAACGATAAACTACTCCACTCCATCTACGTTCTTAGAACACGACATGTTTTGGGACAATGAAGAACTTAAATCACTTCTttcaaaagaacaacaaaacCCACTTTACATTTTTCTTCAAACAAACCCTGTTTTAGAAACTATTCGCAGAGAATCTGTTGAATGGATTCTAAAAGTCAATGCTCATTACTCATTTTCACCTCTTACAGCTATTCTTGCTGTTAACTACTTTGATAGGTTTCTATTCAGTTTCCGTTTTCAGAATGAGAAGCCATGGATGACTCAGCTTGCTGCTGTTGCTTGTCTTTCTCTTGCTGCTAAAATGGAAGAGACCCATGTTCCTCTTTTACTAGATCTTCAAGTTGAAGAAAGTAGATACTTATTTGAAGCTAAAACGATTAAAAAGATGGAGATTTTGGTACTTTCAACACTTGGGTGGAAGATGAATCCAGCAACACCACTTTCATTCATTGATTATATTATCAGAAGACTTGGATTGAAAGATCGTCTTTGTTGGGAGTTTCTTAAGAGATGTGAAGGTGTTCTTCTTTCTGTCATTAGATCAGATTCTAAATTTATGAGTTATCTACCTTCTGTTTTGGCAACTGCTACAATGATTCATGTTTTCAACAGTGTGGAGCCTAGTTTAGGTGATGAATACCAAAATCAGCTTCTTGGTATTCTTGGAATCAATAAAGACAAGGTGGATGAATGTTGCAAGCTGATTTTGAAACTATGGTCAGGGTATGAGGAGGAGAATCAATGCAACAAACGTAAATTTGGGTCAATTCCAAGTAGTCCAAATGGAGTAATGGATGTGTCTTTTAGTTGTGAAAATTCCAATGATTCATGGACTATAGCAGCAACAGCAGCAACTTCAGTATCATCTTCACCAGAGCCTTTATCTAAGAAGATTAGAACTCAACAAGAACAGCTTCTATTAAACTCTTCAAAATCTGATTTTCTTAGCATTCCTCATTAA 1077 0.3463 MFLLDTLYCSEQHWEEEEQEQDEYDNVSLNNNTTINYSTPSTFLEHDMFWDNEELKSLLSKEQQNPLYIFLQTNPVLETIRRESVEWILKVNAHYSFSPLTAILAVNYFDRFLFSFRFQNEKPWMTQLAAVACLSLAAKMEETHVPLLLDLQVEESRYLFEAKTIKKMEILVLSTLGWKMNPATPLSFIDYIIRRLGLKDRLCWEFLKRCEGVLLSVIRSDSKFMSYLPSVLATATMIHVFNSVEPSLGDEYQNQLLGILGINKDKVDECCKLILKLWSGYEEENQCNKRKFGSIPSSPNGVMDVSFSCENSNDSWTIAATAATSVSSSPEPLSKKIRTQQEQLLLNSSKSDFLSIPH 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00926 358 Pfam Cyclin, C-terminal domain 184 309 IPR004367 -
Tsu07g00926 358 SMART Cyclin_C_2 183 311 IPR004367 -
Tsu07g00926 358 Gene3D - 65 181 - -
Tsu07g00926 358 SUPERFAMILY Cyclin-like 165 297 IPR036915 -
Tsu07g00926 358 SUPERFAMILY Cyclin-like 49 181 IPR036915 -
Tsu07g00926 358 SMART cyclin_7 86 174 IPR013763 -
Tsu07g00926 358 ProSitePatterns Cyclins signature. 81 112 IPR006671 -
Tsu07g00926 358 Gene3D - 58 272 - -
Tsu07g00926 358 Pfam Cyclin, N-terminal domain 61 181 IPR006671 -
Tsu07g00926 358 PANTHER CYCLINS 25 338 IPR039361 -
Tsu07g00926 358 CDD CYCLIN 81 173 IPR013763 -
Tsu07g00926 358 PANTHER CYCLIN D3.1 PROTEIN 25 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00926 Tsu-Chr7 7580225 7582177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00926 2 277 Core Cell Cycle Gene Families AT4G34160 52.899 3.43e-97 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00926 K14505 - aprc:113874132 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00926 07 7580225 7582177 Tsu04g02122 04 23449963 23452262 ECH
Tsu07g00926 07 7580225 7582177 Tsu01g04763 01 54777775 54780155 ECH
Tsu07g00926 07 7580225 7582177 Tsu07g00926 07 7580225 7582177 ECH