Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00920 ATGGCAAATAGAGACCAACCCGTGAATGGAAAAAACTCAAAACTCTCAATTTTTAATAACGGTAATCTCATTTTAACCGATgcagaaagaaaaagaacaccAATTTGGTCCATTACAACTTTCTCTCCTTTTCCATTACAACTAAAGCTTCAAAACAATGGTAACCTTGTACTTGAAACTTTACAAAAAACCGAAAAACATACTAATGTTACTATCATTTGGCAAAGCTTTGATTTTCCAACCGATACACTTCTTCCGGGCCAAGAACTTACAGAACATTCAACCGTAGTTTCAtccaaaagcaaaacaaatttTTCCTCTGGTTTCTACAGACTTTATTTCGACAACGATAACGCTCTTCGTCTTTTATACAAAGGTCCTTTGTTAGCAAGTGTCTATTGGCCATCACCTTGGCAATTACCAATTGATATGGGAAGATCAACATACAATGCTACAAAAATTGCGCTACTCGATTCTTTTGGTCATTTCACGTCCTCTGATACGTTTGAATTTCACACCACTGATTATCCTAATAAAGTTCATAGGTTACTCAAAATGGATCATGATGGTAACTTACGTGTTTATAGCTTCAATGAGAAAATGAACACATGGGAAGTAACATGGCAAGCTACTCTTGAACCATGTGAGGTTCATGGTATTTGTGGAGAAAATAGCATGTGTAGTTACGACCATGTTATTGGAAGAACATGTTATTGTTTGAAAGGTTACAAGTTGAAGAATCCTCATGATTGGTCACAAGGGTGTGAGCCTGAGTTTAAACCTGCTGATCTTTCGTGTAATCGCGGTGTTTCTTTCGGTTTTCTTCGTCTTCAAAACACAGAGTTTTTTGGATATGATTTGAATGTAACAAAAGTTACAAGCTTGAAGCAATGTCAAGATTTATGTTTGGGTCTTTGTGAGAGATGCAAAGgttttcaattcaaattcaatcgAGATTCTACTTATGATTGTTTTACTAAAACATTGTTGGTCAATGGAAGGGATTCTCACAATATTGATGGTGATGTTTTCTTGAAATTGCCCAAAGATACTTTGTTATCTTCCACCATGCCACTTAAACATCTACCTTTGAACTGTTCCATTGCTTTGTCTCAACCTATGAATAGATTCTACGAAAAACCAAGCAAAAATTCAACTTTGAGTTTCTTAGTTTGGTTTGCATTAGGATTGGGTGTGTTTGAGATTACCATGATTTTCATTGTGTGGTTCTTTTTGTTTAGAACAAATAAGAACAATGATAATTTTGATCAAGTACAAAGACACCTTCTTTCAGCTACGGGCTTTCAAAAATTTTCATATTCAGAACTCAAGACCGCGACAAAAGGGTTTACCAAAGAGATCGGTCGAGGAGGAGGAGGAACTGTTTACAAAGGTATACTCGATGATGACCGTGTTGCGGCTGTTAAATGCTTAAACGAAGCACATCAAGGAGAAGCCGAATTTCTAGCCGAAATAAGCACAATTGGTATGTTGAACCATATGAATTTGATTGATATGTGGGGATATTGTGTTGAAGGGAAACATAGGATTTTGGTTTATGAGTATATGGAACATGGTTCTTTAGCCGAAAATCTACTTTCTAATTCACTTGATTGGAACAAGAGATTTAATGTAGCTGTTGGAACAGCTAAAGGTTTGGCTTATTTACACGAAGAGTGTTTGGAATGGGTTTTACATTGTGACGTGAAGCCTCATAATATTTTACTTGACACAAAATTTCAACCAAAAGTAGCTGATTTTGGATTATCAAAACTTTTAAATAGAGATGATCGTGATAGTTCTATTTTTTCACGAATTAGAGGAACAAGAGGTTATATGGCACCTGAATGGGTTTATAATCTTAAAATTACTTCGAAAGTTGATGTTTACAGTTATGGAATTGTTTTGCTTGAAATGGTGAGTGGTAAAAGTCCAATGGAAATTCTCAGTCTTGATAATAGTGGAGGTATAGAGCATCATAGAATGGTGACTTGGGTTATGGAAAAGGTGAAAAATGCTCCTACTACTATGTTTTGGATTGAGGAGATTGTTGATGGTAATTTGGAAGGAAAATTCGATGTTAATCAAGTTGAGAATTTGGTTAAAGTTGCGTTGAAGTGTGTTAAAGATGATATGAATGAAAGACCTTCCATGAGTCAAGTAGTTGAAATGCTTCTTGAGTCCAATGAAAAAAGAGGCACCCCTAGTTAA 2211 0.3469 MANRDQPVNGKNSKLSIFNNGNLILTDAERKRTPIWSITTFSPFPLQLKLQNNGNLVLETLQKTEKHTNVTIIWQSFDFPTDTLLPGQELTEHSTVVSSKSKTNFSSGFYRLYFDNDNALRLLYKGPLLASVYWPSPWQLPIDMGRSTYNATKIALLDSFGHFTSSDTFEFHTTDYPNKVHRLLKMDHDGNLRVYSFNEKMNTWEVTWQATLEPCEVHGICGENSMCSYDHVIGRTCYCLKGYKLKNPHDWSQGCEPEFKPADLSCNRGVSFGFLRLQNTEFFGYDLNVTKVTSLKQCQDLCLGLCERCKGFQFKFNRDSTYDCFTKTLLVNGRDSHNIDGDVFLKLPKDTLLSSTMPLKHLPLNCSIALSQPMNRFYEKPSKNSTLSFLVWFALGLGVFEITMIFIVWFFLFRTNKNNDNFDQVQRHLLSATGFQKFSYSELKTATKGFTKEIGRGGGGTVYKGILDDDRVAAVKCLNEAHQGEAEFLAEISTIGMLNHMNLIDMWGYCVEGKHRILVYEYMEHGSLAENLLSNSLDWNKRFNVAVGTAKGLAYLHEECLEWVLHCDVKPHNILLDTKFQPKVADFGLSKLLNRDDRDSSIFSRIRGTRGYMAPEWVYNLKITSKVDVYSYGIVLLEMVSGKSPMEILSLDNSGGIEHHRMVTWVMEKVKNAPTTMFWIEEIVDGNLEGKFDVNQVENLVKVALKCVKDDMNERPSMSQVVEMLLESNEKRGTPS 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00920 736 ProSiteProfiles Protein kinase domain profile. 448 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00920 736 SUPERFAMILY Protein kinase-like (PK-like) 427 725 IPR011009 -
Tsu07g00920 736 SMART serkin_6 448 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00920 736 ProSiteProfiles EGF-like domain profile. 211 249 IPR000742 -
Tsu07g00920 736 Gene3D Transferase(Phosphotransferase) domain 1 523 734 - -
Tsu07g00920 736 Pfam D-mannose binding lectin 2 94 IPR001480 -
Tsu07g00920 736 SUPERFAMILY alpha-D-mannose-specific plant lectins 1 137 IPR036426 -
Tsu07g00920 736 PANTHER OS07G0415500 PROTEIN 1 730 - -
Tsu07g00920 736 Pfam Protein kinase domain 452 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00920 736 Gene3D Phosphorylase Kinase; domain 1 413 522 - -
Tsu07g00920 736 CDD STKc_IRAK 454 727 - -
Tsu07g00920 736 ProSiteProfiles PAN/Apple domain profile. 266 348 IPR003609 -
Tsu07g00920 736 PANTHER RECEPTOR PROTEIN KINASE ZMPK1-RELATED 1 730 - -
Tsu07g00920 736 CDD PAN_AP_plant 263 348 - -
Tsu07g00920 736 Pfam S-locus glycoprotein domain 165 246 IPR000858 GO:0048544
Tsu07g00920 736 ProSitePatterns Protein kinases ATP-binding region signature. 454 476 IPR017441 GO:0005524
Tsu07g00920 736 Gene3D - 2 137 IPR036426 -
Tsu07g00920 736 ProSiteProfiles Bulb-type lectin domain profile. 1 71 IPR001480 -
Tsu07g00920 736 PIRSF SRK 1 736 IPR024171 GO:0004674
Tsu07g00920 736 ProSitePatterns Serine/Threonine protein kinases active-site signature. 564 576 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00920 Tsu-Chr7 7526501 7528711 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00920 244 725 Receptor kinase-like Gene Family AT5G45780 33.602 1.34e-67 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tsu07g00920 Pkinase 8.1e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00920 - - gmx:100816469 1053.51