Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00915 ATGGAAACTCGCGCCTCAAAGAAGAGATCAAACACCGCTCAACAACCACCACAAGTCATTGTTCCCAAAAGACAGAGAGTTGTTTTGGCCGAAATTCCCGATCTCAGTTTTCCCCAATTTCAGCCTACACAGAAACTCCAAGTTCGGAGAAACCCTAACCTCAACAATTCAGCAACAGCAACAAGGCCTCCTTGCATTGATAATCAACAAATTATTGAGCCTTATGTATCCGATATATTCGATTATCTTCGCACAATGGAGAATAAGAGAAGACCAATGGTTGGTTACATGGAGAATGTTCAAACAGACATTACATCAAACATGAGGGGGACATTGGTTGATTGGTTAGTTGAGGTTGCTGACGAATACAAACTTCTTCCCGATACCCTTCATCTATCCGTTTCATACATTGATAGATTCCTATCTCTTAACACTCTCAACAGATCCAAATTTCAGTTGCTTGGTGTTACTTCCATGCTCATTGCATCGAAGTATGAAGAAATCACCCCACCCAAAGCTGTGGATTTCTGCGAAATTACTGATAACAACTATGACTTGGAGGAGGTTATAAAGATGGAAGCTGGCATACTCAAGTCCCTAAATTTTGAAATGGGCAACCCTAATGTCATCACATTTCTAAAGAGGTTTGTCGGGATTGCTTCTGAGAATCAAAAGACTTCTAATTCGCAGTTTGAGTATCTATGTAACTATCTCGCTGACTTAAGCTTGTTGGACTATGAGTGTATAAGATTCTTGCCTTCTGTTGTGGCTGCATCGGTTATATTTCTTGCCAGATTTATCATCCAGCCTGAAGTAAATCCATGGACTTCATCCCTGTGTGAATGCTTAGGATACGAATCAGCTGATTTGGAAGAATGTGTTACCATGTTACACGACTTGTATTTGTCAAGAAGGGCGGCATCCTTCAAAGCTGTTCGTGACAAATACAAGCAGAACAAGTTCAAATGTGTGGCAAACTTGCCTTCCCCTCCTGAGGTGCCAAACCATTACTACTTAATCTATTGCTGA 1029 0.4101 METRASKKRSNTAQQPPQVIVPKRQRVVLAEIPDLSFPQFQPTQKLQVRRNPNLNNSATATRPPCIDNQQIIEPYVSDIFDYLRTMENKRRPMVGYMENVQTDITSNMRGTLVDWLVEVADEYKLLPDTLHLSVSYIDRFLSLNTLNRSKFQLLGVTSMLIASKYEEITPPKAVDFCEITDNNYDLEEVIKMEAGILKSLNFEMGNPNVITFLKRFVGIASENQKTSNSQFEYLCNYLADLSLLDYECIRFLPSVVAASVIFLARFIIQPEVNPWTSSLCECLGYESADLEECVTMLHDLYLSRRAASFKAVRDKYKQNKFKCVANLPSPPEVPNHYYLIYC 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00915 342 MobiDBLite consensus disorder prediction 1 20 - -
Tsu07g00915 342 SMART Cyclin_C_2 207 330 IPR004367 -
Tsu07g00915 342 CDD CYCLIN 108 197 IPR013763 -
Tsu07g00915 342 SUPERFAMILY Cyclin-like 67 204 IPR036915 -
Tsu07g00915 342 PANTHER CYCLIN-A3-1-RELATED 64 338 - -
Tsu07g00915 342 Gene3D - 78 326 - -
Tsu07g00915 342 CDD CYCLIN 207 298 IPR013763 -
Tsu07g00915 342 Pfam Cyclin, N-terminal domain 78 204 IPR006671 -
Tsu07g00915 342 ProSitePatterns Cyclins signature. 109 140 IPR006671 -
Tsu07g00915 342 PANTHER CYCLINS 64 338 IPR039361 -
Tsu07g00915 342 SMART cyclin_7 211 299 IPR013763 -
Tsu07g00915 342 SMART cyclin_7 114 198 IPR013763 -
Tsu07g00915 342 Gene3D - 92 205 - -
Tsu07g00915 342 SUPERFAMILY Cyclin-like 207 331 IPR036915 -
Tsu07g00915 342 Pfam Cyclin, C-terminal domain 207 329 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00915 Tsu-Chr7 7457878 7464096 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00915 3 334 Core Cell Cycle Gene Families AT5G43080 53.529 1.18e-126 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00915 K06627 - gmx:100787417 416.387