Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00914 ATGGAGACTCGTGCTGCAAGGAAGAGGGCTAACTCAAACACTGAACCAATTGTCttgaacaataaaaaacaaagggtTGTTTTGGGTGAACTTCCCAATTTTCCTGATCTTAATTGTTCTGAAAATTTATCCATTGAAAAGGTAAAGGTTCAATCTTGGAAAAAACCTACGGTCAAGAAATCGTCAACAGCTGTTTATTTGTTTCCTAATTTCAATTTAGAGAAGCCGGTTTTCGACAATAAGAATGCAATATTTAATGATGAACAAATTGGAGAGCCGTATGCATCTCATATATCCAACTATCTTCGTTCAATGGAGATGCAGAAAAAGAGAAGACCTATGGTTGGATATATCGAGAAAGTTCAGAGAGGTGTTACTTCAAACATGAGAGGAATATTGATTGATTGGTTAGTTGAGGTTGCTGATGAATACAAGCTTCTTCCAGAAACCCTTCATCTTTCGGTTTCGTACATCGATAGGTTCCTATCTCTTAATGTTATCAACAGATCTAACCTTCAGTTGCTTGGTGTTTCATCTATGCTTATTGCATCAAAGTATGAAGAAATATCCCCACCAAAGGCTGTAGATTTCTGCAAAATTACTGATAACACCTATCAGCTGAAACAGGTTATTAAGATGGAAGCTGACATACTCAAGTCGCTGAATTTTGAAATGGGCAACCCTCATGTTTACACATTTTTGAAGGAGTTTATGGGATTTGCTACTGAAAATCAAAAGAATTCAAAACTGCAAATGGAATTTCTGTGTAACTATCTTGCTGAGCTAAGCTTGTTGGAATATGAATGTATAAGATTTTTACCTTCTGTGGTGGCTGCGTCTGTTATATTTCTTGCTAGATTCATTATCCGTCCTGGTGTATATCCTTGGACTTCATCATTGAGTGATAGCTTGGGTTATAAGTCTGATGAGCTGGAAGAATGTGTTCTGATTTTACATGATTTGTATTTGTCGAGAAGAGCTGCATCGTTGAAAGCTGTTAAGCAGAAATACAAACAAGACAAGTTCAAATCTGTGGCAAACTTGCCTGTACCACCAGAGGTACCAAACCATTATTTTGAAGAAGAGTGA 1089 0.3636 METRAARKRANSNTEPIVLNNKKQRVVLGELPNFPDLNCSENLSIEKVKVQSWKKPTVKKSSTAVYLFPNFNLEKPVFDNKNAIFNDEQIGEPYASHISNYLRSMEMQKKRRPMVGYIEKVQRGVTSNMRGILIDWLVEVADEYKLLPETLHLSVSYIDRFLSLNVINRSNLQLLGVSSMLIASKYEEISPPKAVDFCKITDNTYQLKQVIKMEADILKSLNFEMGNPHVYTFLKEFMGFATENQKNSKLQMEFLCNYLAELSLLEYECIRFLPSVVAASVIFLARFIIRPGVYPWTSSLSDSLGYKSDELEECVLILHDLYLSRRAASLKAVKQKYKQDKFKSVANLPVPPEVPNHYFEEE 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00914 362 ProSitePatterns Cyclins signature. 130 161 IPR006671 -
Tsu07g00914 362 Pfam Cyclin, C-terminal domain 228 349 IPR004367 -
Tsu07g00914 362 Gene3D - 111 226 - -
Tsu07g00914 362 Gene3D - 98 347 - -
Tsu07g00914 362 SUPERFAMILY Cyclin-like 228 353 IPR036915 -
Tsu07g00914 362 PIRSF Cyclin_A_B_D_E 2 358 IPR039361 -
Tsu07g00914 362 Pfam Cyclin, N-terminal domain 98 225 IPR006671 -
Tsu07g00914 362 CDD CYCLIN 129 218 IPR013763 -
Tsu07g00914 362 SUPERFAMILY Cyclin-like 86 225 IPR036915 -
Tsu07g00914 362 PANTHER CYCLIN-A3-1-RELATED 18 361 - -
Tsu07g00914 362 PANTHER CYCLINS 18 361 IPR039361 -
Tsu07g00914 362 CDD CYCLIN 228 319 IPR013763 -
Tsu07g00914 362 SMART Cyclin_C_2 228 351 IPR004367 -
Tsu07g00914 362 SMART cyclin_7 135 219 IPR013763 -
Tsu07g00914 362 SMART cyclin_7 235 320 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00914 Tsu-Chr7 7447626 7455613 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00914 3 361 Core Cell Cycle Gene Families AT5G43080 51.944 1.38e-125 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00914 K06627 - gmx:100786875 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00914 07 7447626 7455613 Tsu07g00914 07 7447626 7455613 ECH