Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00910 atgaGTGGTCCATCGCGAGAAGAACAAGATTCAAAGGAAGAAGAGGTAAAAGAAGACGACGAAGGTAACCGATTACTGGAGCTAGAAGGTGAAGGTGAATCGGAAGAAGAACTAGAAGCGGCATATGAATCCGGCGAGAAAATCGTAGTAGTAGATTTCGAATTCGATTCAATAGACGATTCAACCGTTCCACCTTTTTCATGGAAAAAGCTATGGATGTTTACTGGACCTGGATTCTTAATGAGTATTGCTTTTTTGGATCCAGGGAATTTAGAAGGGGATCTACAAGCTGGTGCAATTGCTGGTTATTCTCTTCTATGGTTGTTGATGTGGGCTACTTTTATGGGGTTATTGATTCAATTGCTTTCGGCGAGAGTTGGTGTTGCTACTGGTCGTCATTTAGCTGAACTTTGTAGAGATGAGTATCCTAATTGGGCTCGTTATGTGCTTTGGTTTATGGCTGAACTTGCTTTAATTGGTGCTGATATTCAAGAGGTTATTGGTAGTGCTATTGCTATTCAGATTCTTAGTCGTGGTGTTTTGCCTCTTTGGGCTGGTGTTCTTATCACTGCTTCTGATTGctttttctttctctttcttgagAACTATGGAGTGAGGAAGTTGGAAGCTGCTTTTGCAGTTCTCATCGGTACCATGGCTCTTTCTTTTGCCTGGATGTTTGGTGACACAAAACCTAGCGGAAAAGAGCTTGTCATGGGTATTTTGATTCCAAGACTTAGCTCAAAAACAATCCGTCAGGCTGTGGGCGTTGTGGGTTGTGTCATTATGCCTCACAATGTATTTCTACATTCTGCTTTAGTGCAGTCAAGGAAGATTGATCCGAATAAGAAAGGTCGGGTGCAAGAGGCTCTTAATTACTACAATATTGAGTCAACAGTTGCACTTGCAGTCACCTTCATGATCAATCTGTTTGTCACAACAGTTTTTGCTAAGGGTTTCTATGGTACACAGCAGGCAAATAGCATAGGATTGGTAAATGCAGGCCAGTATCTTGAGGAAAAATATGGAGGTGGACTCTTCCCTATTCTTTATATATGGGGGATTGGATTATTGGCAGCTGGACAAAGTAGCACTATCACTGGCACGTATGCTGGGCAATTCATAATGGGGGGTTTTCTCAATCTTCGATTAAAAAAATGGTTGAGAGCATTGATCACTCGGAGTTGTGCAATTGTGCCAACTATAATTGTAGCTATTGTTTATAACAGCTCAGAAGGCTCGTTGGATGTTTTGAATGAATGGCTTAATGTGCTTCAGTCCGTACAAATTCCCTTTGCATTGATTCCCCTCCTCACGTTGGTCTCCAAAGAGCGTATCATGGGGTCCTTTAAGGTTGGGCCTGTTCTTGAGaGAGTTGCTTGGACGGTTGCTGCACTGATAATAGTAATTAATGGGTATCTCTTAGTAGACTTCTTCCTTTCTGAGGTGAACGGCGTACTATTTGGTTTTGTAGCCTGCTCTTGCACAGTGTCTTATATTGCAttcattgtatatttaatttcacAAAGTGGAATTCTTCCTTCTGCTTGGGTTGATCGATTTCCAAAGGGTTTTTCTTCTATTGGGAATTAA 1593 0.4068 MSGPSREEQDSKEEEVKEDDEGNRLLELEGEGESEEELEAAYESGEKIVVVDFEFDSIDDSTVPPFSWKKLWMFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATFMGLLIQLLSARVGVATGRHLAELCRDEYPNWARYVLWFMAELALIGADIQEVIGSAIAIQILSRGVLPLWAGVLITASDCFFFLFLENYGVRKLEAAFAVLIGTMALSFAWMFGDTKPSGKELVMGILIPRLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSRKIDPNKKGRVQEALNYYNIESTVALAVTFMINLFVTTVFAKGFYGTQQANSIGLVNAGQYLEEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWLRALITRSCAIVPTIIVAIVYNSSEGSLDVLNEWLNVLQSVQIPFALIPLLTLVSKERIMGSFKVGPVLERVAWTVAALIIVINGYLLVDFFLSEVNGVLFGFVACSCTVSYIAFIVYLISQSGILPSAWVDRFPKGFSSIGN 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00910 530 PANTHER BNAC08G04640D PROTEIN 31 518 - -
Tsu07g00910 530 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 69 447 IPR001046 GO:0016020|GO:0030001|GO:0046873
Tsu07g00910 530 MobiDBLite consensus disorder prediction 1 37 - -
Tsu07g00910 530 Pfam Natural resistance-associated macrophage protein 92 453 IPR001046 GO:0016020|GO:0030001|GO:0046873
Tsu07g00910 530 PRINTS Natural resistance-associated macrophage protein signature 180 199 IPR001046 GO:0016020|GO:0030001|GO:0046873
Tsu07g00910 530 PRINTS Natural resistance-associated macrophage protein signature 423 442 IPR001046 GO:0016020|GO:0030001|GO:0046873
Tsu07g00910 530 PRINTS Natural resistance-associated macrophage protein signature 361 380 IPR001046 GO:0016020|GO:0030001|GO:0046873
Tsu07g00910 530 PRINTS Natural resistance-associated macrophage protein signature 389 406 IPR001046 GO:0016020|GO:0030001|GO:0046873
Tsu07g00910 530 PRINTS Natural resistance-associated macrophage protein signature 150 176 IPR001046 GO:0016020|GO:0030001|GO:0046873
Tsu07g00910 530 PRINTS Natural resistance-associated macrophage protein signature 205 226 IPR001046 GO:0016020|GO:0030001|GO:0046873
Tsu07g00910 530 PRINTS Natural resistance-associated macrophage protein signature 254 277 IPR001046 GO:0016020|GO:0030001|GO:0046873
Tsu07g00910 530 Hamap Divalent metal cation transporter MntH [mntH]. 58 479 IPR001046 GO:0016020|GO:0030001|GO:0046873
Tsu07g00910 530 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 31 518 IPR001046 GO:0016020|GO:0030001|GO:0046873
Tsu07g00910 530 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00910 Tsu-Chr7 7422256 7427343 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00910 8 510 Inorganic Solute Cotransporters AT1G47240 81.102 0.0 833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00910 K21398 - gmx:100791117 881.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00910 07 7422256 7427343 Tsu07g00910 07 7422256 7427343 ECH