Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00891 ATGGATCAAACACTTGAAGCTTTCCCTCATGGTGAATGGGAATGCTTTCAAAGAATGTTTGCAACTGAAGAACATGATAACCTTATGCTTATGGAAGATCATGGCAACTTTGGAGTACAATCCATGTTTGATTCTCACAACAACTATAATTCACAAGAAAGTAACCATAGCTACTCTCTTGATTATTCTAATCATATGGTAGCTAATAATGGTGACATAACAGAGAATTTTGATCACAGTCAAGTCCAACCTATTGTCTTTCCCGCCAAACAGTTGAAGCCGAAAAGGATGCTTGAtgtgccagaatttcaagtGCATGCAGAAGATAAGATAGACAAATGTTTGAATCCAATGAAAAAACCTCGCGCTTTAAAAGATCTTCAAAGATGCGTGGCGAATGCCGAGTCCAAGAACAGCAAGAAGGTTGATAGAAATGGGAACACTGCAGAAGAAACCAATGCAAGTGTAGATGGACATAGCTCTAGTGGTTATACCTCAGAGGAGCATAACATGTATGAGGAAAACAGTGTAGGAGCTACTTCAGCATCTAAATCAACTATGACTCTCAACTCAAATGGCAAAACAAGAGCTAATAGAGGATCAGCCACAGATCCTCAAAGCCTTTATGCAAGGAAAAGAAGGGAGAAAATAAATGAGAGACTAAGAACTCTACAAAATCTTGTACCAAACGGAACAAAGGTTGATATAAGCACAATGCTTGAAGATGCAATCCATTATGTGAAATTTTTGCAGCTCCAAATCAAGCTTCTAAGCTCTGATGATATGTGGATGTATGCCGCAATTGCTTATAATGGACTTGACATTGGAGTCAATCTCAACCAGAAAATTTCTCCACCACCATGA 864 0.3785 MDQTLEAFPHGEWECFQRMFATEEHDNLMLMEDHGNFGVQSMFDSHNNYNSQESNHSYSLDYSNHMVANNGDITENFDHSQVQPIVFPAKQLKPKRMLDVPEFQVHAEDKIDKCLNPMKKPRALKDLQRCVANAESKNSKKVDRNGNTAEETNASVDGHSSSGYTSEEHNMYEENSVGATSASKSTMTLNSNGKTRANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTKVDISTMLEDAIHYVKFLQLQIKLLSSDDMWMYAAIAYNGLDIGVNLNQKISPPP 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00891 287 PANTHER TRANSCRIPTION FACTOR BHLH54 47 284 - -
Tsu07g00891 287 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 200 266 IPR036638 GO:0046983
Tsu07g00891 287 Gene3D - 199 258 IPR036638 GO:0046983
Tsu07g00891 287 MobiDBLite consensus disorder prediction 135 207 - -
Tsu07g00891 287 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 47 284 - -
Tsu07g00891 287 Pfam Helix-loop-helix DNA-binding domain 211 251 IPR011598 GO:0046983
Tsu07g00891 287 MobiDBLite consensus disorder prediction 148 205 - -
Tsu07g00891 287 CDD bHLH_AtIND_like 202 264 - -
Tsu07g00891 287 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 201 250 IPR011598 GO:0046983
Tsu07g00891 287 SMART finulus 207 256 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00891 Tsu-Chr7 7299787 7301099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00891 160 277 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 71.074 5.25e-54 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Tsu07g00891 HLH 1.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00891 - - mtr:MTR_3g103030 412.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00891 07 7299787 7301099 Tsu07g00891 07 7299787 7301099 ECH