Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00887 ATGGATGATCTTTTGTGCAAAGAAAATGAAACGTTTTTTCAAGTTGAAGAATGCTCAATGAATAATCAATCAGAAGACGAAGAGTATGTGGGATTGTTGATTCAGAAAGAGATTGCATTTGGCTTCAAAAAAGATCAAAATTTTCTGTTTGAAGATTCTGTCAAACGTGCTCGTTTGAATGCAATCTATTGGATTCTCAAAAAAACAGAAGCATTGGATTTTCACTTTGAAACAGCTTATTTGTCAGTAACATATTTGGATCAATTCCTTTCAAAAAGATTCATTGATGGTGAGAAAGATTGGGCTATAAGATTGCTATCAATTGCATGTCTTTCTTTGGCTGCAAAGATGGAAGAGTACATTGTGCCAGGACTATCAAGGTTTCAATTGGATGATAATTATTTCTTTGATGGAAAAGTGGTTCAAAAAATGGAGCTTTTTGTTCTTAGTACATTGGATTGGAACATGGGTATTATCACTCCTTTTTCATTCCTTTCTTACTTCATCAAAATGTTCTGCaatgaatcatcatcatcaaatccTATTGTTTCCAACACAATGCAACCTATCTTCACTGTAATAATGGAAGAGATCAATCTAATGGATCACAAACCATCTGTTGTTGCAGCAGCTGCTACTTTAGTGGCATTGGATAAAAAATTGACCATAGAAGATGTGAGATTGAAAATGAATTCAATTTCTCAATATCCATTACTTGAACCAAATGATGTATTTGCTTGCTACAATATAATTCAAAGATTATATGAGGAGAAGATTAAAAGAGAAGAGCATAAGAATTTATGTACACCGAATTCTTCGGTTATTCGATCCAGGCCAACTGACTATGCTGTTGCTATGACAAAGAGAAGAAGACTCTCATTCACCGATGATGAAGATGGTGGTGGTGACAAGAAGGGACCACATCAAGAAAATcccaaaatttga 945 0.3312 MDDLLCKENETFFQVEECSMNNQSEDEEYVGLLIQKEIAFGFKKDQNFLFEDSVKRARLNAIYWILKKTEALDFHFETAYLSVTYLDQFLSKRFIDGEKDWAIRLLSIACLSLAAKMEEYIVPGLSRFQLDDNYFFDGKVVQKMELFVLSTLDWNMGIITPFSFLSYFIKMFCNESSSSNPIVSNTMQPIFTVIMEEINLMDHKPSVVAAAATLVALDKKLTIEDVRLKMNSISQYPLLEPNDVFACYNIIQRLYEEKIKREEHKNLCTPNSSVIRSRPTDYAVAMTKRRRLSFTDDEDGGGDKKGPHQENPKI 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00887 314 CDD CYCLIN 58 149 IPR013763 -
Tsu07g00887 314 PANTHER CYCLINS 24 290 IPR039361 -
Tsu07g00887 314 Pfam Cyclin, N-terminal domain 42 156 IPR006671 -
Tsu07g00887 314 PANTHER CYCLIN-D5-1 24 290 - -
Tsu07g00887 314 SUPERFAMILY Cyclin-like 26 156 IPR036915 -
Tsu07g00887 314 Gene3D - 50 151 - -
Tsu07g00887 314 SMART cyclin_7 63 150 IPR013763 -
Tsu07g00887 314 SUPERFAMILY Cyclin-like 141 271 IPR036915 -
Tsu07g00887 314 MobiDBLite consensus disorder prediction 290 314 - -
Tsu07g00887 314 Gene3D - 152 276 - -
Tsu07g00887 314 Pfam Cyclin, C-terminal domain 159 265 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00887 Tsu-Chr7 7268651 7270195 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00887 16 236 Core Cell Cycle Gene Families AT4G37630 39.316 1.28e-42 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00887 K18811 - gmx:100780266 325.479