Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00870 ATGGGTAGGGCTTTTTCTTTGCAAGATGAGCCGGAAGTTTATAGGATAAGGTTGCCTTTTGATGATGCACCAGGATTGACAATGGCTACAGCATTTGGAGGATTCTGCTTGAAGGAGTATGGTGTGATTTCTATACCTGAATTTTCTCACCGTCTGCTTACATACAGAGACCAATTCATTGTTCTTGCCTCAGATGGGGAGAAGCAGAAAGAATCAAGCAGTGCAAGGGAGTACGGTGTGATTTCTATACCTGATTTTTCTCACCGTTTGCTTGCAGACAGAGATCAATTCATTGTTCTTGCCTCGGATGGGGAGAAGCGGAAAGAATCAAGCAGTGCAAGGGTAGGGTTTTTGCTTTCTAAGATGAGCCTGAAGTTTCTAGGATGTGGGTGCCTTTTGATGATGCACCAGGATTGGTAA 420 0.4405 MGRAFSLQDEPEVYRIRLPFDDAPGLTMATAFGGFCLKEYGVISIPEFSHRLLTYRDQFIVLASDGEKQKESSSAREYGVISIPDFSHRLLADRDQFIVLASDGEKRKESSSARVGFLLSKMSLKFLGCGCLLMMHQDW 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00870 139 PANTHER ALPHABET, ISOFORM E-RELATED 76 104 - -
Tsu07g00870 139 PANTHER PROTEIN PHOSPHATASE 2C 1-RELATED 2 66 - -
Tsu07g00870 139 SUPERFAMILY PP2C-like 25 66 IPR036457 -
Tsu07g00870 139 PANTHER PROTEIN PHOSPHATASE 2C 1-RELATED 76 104 - -
Tsu07g00870 139 Gene3D - 3 67 IPR036457 -
Tsu07g00870 139 Gene3D - 68 105 IPR036457 -
Tsu07g00870 139 PANTHER ALPHABET, ISOFORM E-RELATED 2 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00870 Tsu-Chr7 7123960 7126858 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00870 2 66 PP2C-type Phosphatase Gene Family AT1G03590 81.538 2.28e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00870 - - gmx:100788149 115.546