Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tsu07g00864 | ATGGACGACGCCTTTGCTAGATCTATTCCCGAGGTCCTTGATTTCTTTGGGGTGGACCCAACAAAGGGTTTATCAGACACTCAGGTGGTACAACATGGCAGACTTTATGGTGAAAACGTGCTTCATGAAGATCAAAGAGCTCCATTTTGGAAATTGGTTTTGAAGCAATTTGATGACTTGCTTGTGAAGATACTAATTGCAGCTGCTCTTATATCATTTATTCTGGCATTAATTAATGGTGAAACAGGCTTGATGGCATTTCTGGAGCCTTCTGTTATTCTGATGATATTGGCGGCAAATGCAGCTGTGGGAGTGATCACAGAAACAAATGCTGAAAAAGCTCTTGAGGAGCTGCGTGCCTATCAAGCTGACGTAGCAACTGTCTTGCGAAATGGTTGTTTTTCCATACTTCCTGCAACTGAACTTGTTCCTGGGGATATTGTGGAAGTTTCTGTGGGGTGCAAAATTCCTGCTGATATGAAGATGATTGAGATGCTAAGTAATGAAGTACGTGTTGATCAAGCTATTCTAACAGGTGAGAGCAGCTCGGTGGAAAAAGAGCTTAAAACTATCACAGCAACAAATGCGGTATACCaggataaaacaaatattctgtTCTCGGGAACAGTTGTCGTTGCTGGTAGGGCAAGAGCTGTTGTGGTGGGGGTTGGTCCTAACACTGCCATGGGAAGCATACGTGATTCAATGTTGCGAACAGAAGATGAGGTGACACCATTGAAAAAGAAGCTGGATGAGTTTGGCACTTTTTTGGCCAAGGTTATTGCAGGGATATGTGTGTTGGTTTGGATTGTTAATATTGGTCACTTTCGTGACCCTTCTCATGGTGGTTTCGTGCACGGGGCAAttcattattttaagATTGCAGTTGCTCTGGCAGTTGCAGCAATTCCTGAAGGGCTCCCTGCTGTTGTAACAACGTGTTTGGCTCTTGGAACAAAGCGAATGGCTAGGTTGAATGCAATTGTTCGCTCTTTACCATCTGTTGAAACCTTGGGCTGTACCACTGTAATTTGCAGTGACAAAACTGGGACTCTAACTACCAATATGATGTCAGTTGCGAAGATATGTGTTGTTGAATCTGCAAAAAGTAGTCCTTTTGTTACCGAATATGGTGTCAGTGGAACAACATATGCACCTGAAGGTAGAATCTTTGACCAGGAAGGGGTGCAGCTTGACATTCCAGCTCAATCGCAATGTCTTCTTCACATGGCAATGTGTTCTGCTCTTTGCAATGAATCAACCCTGCAGTATAATCCTGATAAAGGGAAGTACGAAAAAATTGGTGAGTCAACTGAAGTAGCACTACGTGTTTTGGTAGAAAAGGTTGGTCTCCCTGGTTTTAATTCTATGCCGTCAGCATTGAATATGTTGAGCAAGCATGAGCGCGCTTCTTACTGTAACCACTATTGGGAAGAACAATTTAGAAAGTTAGATGTTTTGGATTTTTCTCGAGATCGGAAAATGATGAGTGTCCTTTGCAGCCGGAACCAGTTGCATGTTTTATTCTCAAAGGGTGCTCCAGAAAGTATAATCTCTAAATGTACAACTATTCTATGCAATGGTGATGGTTCGGTCATGCCACTTACTGCTGATATTCGAGCAGAGCTGGACTCAAAGTTCAACAGTTTTGCAGGAAAGGAAACATTGAGATGCTTAGCTTTGGCGCTCAAATGGATGCCCTCAGTTCAACAGACGCTGTCCTTTGATGATGAGAAAGATCTCACATTTATTGGATTGGCTGGGATGCTGGATCCACCACGAGATGAAGTAAGAAATGCCATGCTTTCATGTATGACTGCTGGCATACGTGTTATTGTTGTTACTGGAGATAACAAGTCCACTGCTGAGTCACTTTGCCGCAAGATAGGTGCTTTTGACCATATGATAGATTTTACTGAACATTCTTACACTGCTTCTGAGTTTGAAGAACTTCCAGCAATACAACAAACTATAGCATTGCAGCGTATGGCACTTTTTACCAGggTCGAGCCTTCCCACAAAAGGATGCTGGTTGAAGCATTGCAGCACCAAAATGAAGTGGTTGCAATGACTGGTGACGGAGTCAATGATGCACCTGCCCTGAAGAAGGCAGATATAGGAATTGCTATGGGTTCAGGGACTGCTGTTGCTAAGAGTGCTTCAGACATGGTCCTGGCTGATGACAACTTTGCCTCAATTGTTGCGGCCGTGGCAGAGGGAAGGGCTATATACAATAACACAAAGCAGTTTATTAGATACATGATTTCTTCCAACATTGGTGAAGTAGTATGTATATTTGTGGCTGCAGTGCTTGGAATACCTGATACCCTGGCCCCTGTCCAGTTGCTTTGGGTCAATTTGGTTACTGATGGATTGCCTGCCACTGCTATTGGCTTCAATAAGCAAGATTCTGATGTGATGAAGGTTAAGCCTCGAAAGGTGAATGAAGCAGTTGTTACAGGTTGGCTCTTCTTTCGGTATTTGGTAATTGGAGCTTATGTTGGCCTTGCGACGGTTGCCGGTTTTATTTGGTGGTTTGTTTACGCTGATAGTGGCCCTAAACTACCATACACTGAATTGATGAATTTTGACACTTGCCCGACCAGGGAGACAACTTATCCATGCACTATATTTGAAGATCGACATCCATCAACCGTATCAATGACTGTGCTTGTAGTTGTTGAGATGTTCAATGCTTTGAACAATCTTAGTGAAAATCAATCCCTCCTGGTCATCCCTCCCTGGAGTAACTTGTGGCTGGTTGGTTCTATAATCCTTACTATGCTTCTTCACATGCTAATTCTGTATGTTCGCCCACTGTCAGTTCTTTTCTCTGTAACTCCATTATCTTGGGCTGATTGGATGGCTGTCCTCTATCTTTCTCTACCGGTTATAATGATTGATGAGGTGTTAAAGTTCTTCTCCAGAAATCCTACCAGTGGTTGGAGGTTCAGATTATGGTTTAGGAGGTCTGATTTACTTCCAAAAAGAGAAGTGCGTGATAAGTAA | 3009 | 0.4267 | MDDAFARSIPEVLDFFGVDPTKGLSDTQVVQHGRLYGENVLHEDQRAPFWKLVLKQFDDLLVKILIAAALISFILALINGETGLMAFLEPSVILMILAANAAVGVITETNAEKALEELRAYQADVATVLRNGCFSILPATELVPGDIVEVSVGCKIPADMKMIEMLSNEVRVDQAILTGESSSVEKELKTITATNAVYQDKTNILFSGTVVVAGRARAVVVGVGPNTAMGSIRDSMLRTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFVHGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVESAKSSPFVTEYGVSGTTYAPEGRIFDQEGVQLDIPAQSQCLLHMAMCSALCNESTLQYNPDKGKYEKIGESTEVALRVLVEKVGLPGFNSMPSALNMLSKHERASYCNHYWEEQFRKLDVLDFSRDRKMMSVLCSRNQLHVLFSKGAPESIISKCTTILCNGDGSVMPLTADIRAELDSKFNSFAGKETLRCLALALKWMPSVQQTLSFDDEKDLTFIGLAGMLDPPRDEVRNAMLSCMTAGIRVIVVTGDNKSTAESLCRKIGAFDHMIDFTEHSYTASEFEELPAIQQTIALQRMALFTRVEPSHKRMLVEALQHQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFASIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMKVKPRKVNEAVVTGWLFFRYLVIGAYVGLATVAGFIWWFVYADSGPKLPYTELMNFDTCPTRETTYPCTIFEDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVGSIILTMLLHMLILYVRPLSVLFSVTPLSWADWMAVLYLSLPVIMIDEVLKFFSRNPTSGWRFRLWFRRSDLLPKREVRDK | 1002 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tsu07g00864 | 1002 | TIGRFAM | ATPase-IIA1_Ca: calcium-translocating P-type ATPase, SERCA-type | 53 | 847 | IPR005782 | GO:0005388|GO:0006816|GO:0016021 | |
| Tsu07g00864 | 1002 | Gene3D | - | 55 | 976 | - | - | |
| Tsu07g00864 | 1002 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 3 | 976 | IPR023298 | - | |
| Tsu07g00864 | 1002 | SUPERFAMILY | HAD-like | 578 | 739 | IPR036412 | - | |
| Tsu07g00864 | 1002 | Pfam | haloacid dehalogenase-like hydrolase | 677 | 734 | - | - | |
| Tsu07g00864 | 1002 | PANTHER | SARCOPLASMIC/ENDOPLASMIC RETICULUM CALCIUM ATPASE 3 | 5 | 985 | - | - | |
| Tsu07g00864 | 1002 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 661 | 776 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
| Tsu07g00864 | 1002 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 92 | 371 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
| Tsu07g00864 | 1002 | Coils | Coil | 111 | 131 | - | - | |
| Tsu07g00864 | 1002 | Pfam | E1-E2 ATPase | 122 | 324 | - | - |
Showing 1 to 10 of 30 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tsu07g00864 | K05853 | - | gmx:100783509 | 1821.59 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Tsu07g00864 | 07 | 7061027 | 7087057 | Tsu07g00864 | 07 | 7061027 | 7087057 | ECH |
Showing 1 to 1 of 1 entries