Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00821 ATGAGAATAGCTAGGAAATGTTCATACTGTGGAAATTTAGGCCACAATTCAAGGACTTGTAATAACAGTCTCAGTCAAGAGCAATTTCAtctttattcttcttcttcaccttCATACTTTGCCACTAATTGGAGTTTTAGAAAGAATTATCTGCTATCATCACAATCATATTCCTCTTTATCAAAATCATATTCCTTGCCTACAATGTTTGGTACAAATGAAAATTCAGATAGTTACTTAGGAAGTGACCATATATCAACAATTGGATCCAGTAAAAAAGGTATGCCATGGACTGAGGAGGAGCACCGTATGTTTCTTAGAGGACTTGAGAAGCTTGGGAAGGGTAACTGGAGAGGTATATCTAGAGATTTTGTAACAACAAGAACACCAACTCAGGTGGCAAGTCATGcacaaaaacattttcttcGTCAATCTCAGAATAGCTTCatcaataaaagaaaacatCTTAGCCTCTTTAAGGTGGGGTGTGAGAGTAAAACTATATTTGAAGCATTTTCTGAACCAAGTGAAGCATTTGGTACATTATCAGGAATAACTAATTTGACAGAAAATGATATCAGCTACATAAGCCAACTAAGTGGAAGTAGAGATTTTCTTTCTCATCCTCAATATTCAGTGCTGAAATGGCCTAACTCTTCAACTTCAACAAATTGTACTCCTTGGAGTGCAGCACCTGATTTAGAACTCAAGCTTGCAACTCCTGGGATGCCATTAGAGCTTACAGAGGCATGCTCTGTAGGCCCTTTAAGCTAA 774 0.3527 MRIARKCSYCGNLGHNSRTCNNSLSQEQFHLYSSSSPSYFATNWSFRKNYLLSSQSYSSLSKSYSLPTMFGTNENSDSYLGSDHISTIGSSKKGMPWTEEEHRMFLRGLEKLGKGNWRGISRDFVTTRTPTQVASHAQKHFLRQSQNSFINKRKHLSLFKVGCESKTIFEAFSEPSEAFGTLSGITNLTENDISYISQLSGSRDFLSHPQYSVLKWPNSSTSTNCTPWSAAPDLELKLATPGMPLELTEACSVGPLS 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00821 257 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 89 145 IPR017930 -
Tsu07g00821 257 SUPERFAMILY Homeodomain-like 90 145 IPR009057 -
Tsu07g00821 257 CDD SANT 96 141 IPR001005 -
Tsu07g00821 257 ProSiteProfiles SANT domain profile. 92 145 IPR017884 -
Tsu07g00821 257 Gene3D - 95 146 - -
Tsu07g00821 257 ProSiteProfiles Myb-like domain profile. 89 141 IPR001005 -
Tsu07g00821 257 Pfam Myb-like DNA-binding domain 95 140 IPR001005 -
Tsu07g00821 257 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 4 168 - -
Tsu07g00821 257 SMART sant 93 143 IPR001005 -
Tsu07g00821 257 PANTHER TRANSCRIPTION FACTOR KUA1 4 168 - -
Tsu07g00821 257 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 92 144 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00821 Tsu-Chr7 6716241 6717572 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Tsu07g00821 Myb_DNA-binding 4e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00821 - - mtr:MTR_3g104370 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00821 07 6716241 6717572 Tsu07g00821 07 6716241 6717572 ECH