Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00805 ATGAAGGGAATTAAAGTAAAAGAGGAAGAAATTCTAGCTTATGCAAGTGTTGGATCAACATcatgttcatcttcttcttcctcttcaggTTCAAATCTTACACCAAAACCTATGGAAGGGTTACATGAAATTGGTCCACCTCCATTTCTCACCAAAACTTTTGATGTTGTTGAAGATCCATCCACTGATTCAATTGTTTCATGGAGTTGTGCTCGTAATAGTTTCGTTGTTTGGGATCTTCATAAATTCTCTACCACCATTTTGCCTCGTTACTTCAAACACAGCAATTTCTCTAGCTTCGTTCGTCAACTTAATACTTATGGTTTTAGAAAAGTTGATCCGGATCGATGGGAATTTGCGAACGAAGGTTTTTTAGCTGGACAGAGGAACTTGTTGAAAACAAttaagagaagaagaaatgttACACAGTCACAGATTATGCAACAAGAAACTGGTGGTGGTGCTTGTATTGAATTAGGAGAGTATGGTCTTGAAGGTGAGATTGAAAGGTTAAGAAGGGATAGGGCTGTTTTAATGGCTGAAATTGTGAAGTTGAGACAGCAGCAGCATAACTCAAGGGATCAGTTATCTGCTATGGAAGCTAGGTTATTGATTACTGAGAAGAAACATCAACAGATGATGACATTCCTTGCAAAAGCACTCAGTAATCAATCTTTTATACAGCAACTGGCAAACAACAGAGAGTTGAAAGGCGTTGAAATGAAGCGAAAACGGAGACTCACTGCTAGTTCAAGTTTGGAGAATTTGCAAAATGATTCTGCTACCATGATGACAGTGCCAGTTGAATCTGTGGTTGATTATTCTAGTCAAGAACAACAAGAGGGGTTAACTACTATTGAGTCTGAGATGGAGACATTATTAAATGCTTATGATAACGAATCAAGCACTGAAATCAAAGATTATAGTACATTGAGTTCAGTTAAAAATGAGAGTAATTTGGGTGATACTGTGTGGGAGGATTTACTAAACCAAGAATTGGTTGGTGGGAATCCAGAGGATGAAGTTGTGATTGGTGATCTTTCTCGAATTGATGTGCCGGTTGAGGATTTGGtagaaaaaaatgatgattggACTGTGGATTTGCAGAACCTTGTTGATCAAATGGGTTTTGAACCTTAG 1140 0.3605 MKGIKVKEEEILAYASVGSTSCSSSSSSSGSNLTPKPMEGLHEIGPPPFLTKTFDVVEDPSTDSIVSWSCARNSFVVWDLHKFSTTILPRYFKHSNFSSFVRQLNTYGFRKVDPDRWEFANEGFLAGQRNLLKTIKRRRNVTQSQIMQQETGGGACIELGEYGLEGEIERLRRDRAVLMAEIVKLRQQQHNSRDQLSAMEARLLITEKKHQQMMTFLAKALSNQSFIQQLANNRELKGVEMKRKRRLTASSSLENLQNDSATMMTVPVESVVDYSSQEQQEGLTTIESEMETLLNAYDNESSTEIKDYSTLSSVKNESNLGDTVWEDLLNQELVGGNPEDEVVIGDLSRIDVPVEDLVEKNDDWTVDLQNLVDQMGFEP 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00805 379 SUPERFAMILY "Winged helix" DNA-binding domain 45 138 IPR036390 -
Tsu07g00805 379 Coils Coil 168 202 - -
Tsu07g00805 379 SMART hsfneu3 45 138 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tsu07g00805 379 Pfam HSF-type DNA-binding 49 138 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tsu07g00805 379 MobiDBLite consensus disorder prediction 19 40 - -
Tsu07g00805 379 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-6B 21 333 - -
Tsu07g00805 379 MobiDBLite consensus disorder prediction 19 35 - -
Tsu07g00805 379 Coils Coil 354 374 - -
Tsu07g00805 379 PRINTS Heat shock factor (HSF) domain signature 49 72 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tsu07g00805 379 PRINTS Heat shock factor (HSF) domain signature 87 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tsu07g00805 379 PRINTS Heat shock factor (HSF) domain signature 100 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tsu07g00805 379 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 21 333 IPR027725 -
Tsu07g00805 379 ProSitePatterns HSF-type DNA-binding domain signature. 88 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tsu07g00805 379 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Tsu07g00805 379 Gene3D - 42 139 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00805 Tsu-Chr7 6593541 6595903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00805 35 377 HSF AT2G26150 52.408 1.31e-120 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Tsu07g00805 HSF_DNA-bind 4.3e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00805 K09419 - gmx:100794605 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00805 07 6593541 6595903 Tsu07g00805 07 6593541 6595903 ECH